Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1764 ATGGCAGATGATCAATTTCGAGCAAGTGCAAATTGGTGGGATTCATCAAGAAACGTTGTGAGGTTTGAAAGCCGGGAATCGCAATCTGGACCTTGGCATGGCGTTGGTGATGATGAAATGAAGCTACCAATAAGATCTTCCACCATGGAAAATTCCATGTCTTCTTCTTCTTCTGCAGGCGCCTCATCAGGTAGGTCCTCTGTGGTGTTCCATGAGAGGCTTCAACAACAACAAAACTTGGATTCCCCAAATTTGAGCAACGACCCCAACTTGCATATGATGATGGGTTTGGGGCTTTCTTCTCACTCATCCATGGATTGGAATCAAGCATCTTTCATGAGAGCAGAAAAGACATCCGAGATGTTGCAGCAAGAAACAGGAATGGGATTGTCAAATAGAGGTTTCTCGTTGGATCAAACACAGTTCAGTCCTCAATACAGTTCCTGTTCCGGAGACAGCAACATCACAAGCCAACAACTATTATCCTCTAATTTTCAGATGGATTCTTCTTCTTCAGCGCCTTTATATTGTAACACTTCAATGCTACAAGGACTATTAGGACCTGAAAGCAATAATCAAGCACACCAAGGACCTATCAGTAATTTTCCATACTCAACGTGTTTGAACAGCAACAATAATAACAACCAATTGCATTTCACTAATAACGCCCCCTTCTGGAACGCTTCGGAGCCTGCGCCGGTTTCCATTAAAGATGCTCGATCCATCTTCTTCCCTTCATTGCACCAACCATTTTCGGCGCCAAGCTTCGATCAACAATCAAAGAAGAATATGGTTGTTTTGCAGAATATATCTGAAGTAAGGGACTCAGGAGGTAGCATGTTGAAGAAAAGTGAGAATGAGCAATCATCAAAAAGGCCTAGAAACGAAACACCTCCATCACCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGAGACAGAATCACTGCCCTACAGCAATTGGTTTCGCCTTTCGGAAAGACTGATACGGCATCGGTGCTCTCTGAGGCCACTGAATACATCAAATTCCTCCATGAGCAAGTGACTGTTTTAAGCACCCCATATATGAAGAGTGGAGCTCAAACACAGCATCACCAGGTAGTGTACAATTCTGGTAAATCAAAGGAAGCTGATGGACCAAAACAGGATCTAAGAAGCCGAGGGCTGTGTCTGGTGCCAATTTCAAGTACATTTCCAGTGACTCATGAACCCACAGTTGATTTTTGGACGCCAACATTTGGAGGAACTTATAGATAA 1260 0.4341 MADDQFRASANWWDSSRNVVRFESRESQSGPWHGVGDDEMKLPIRSSTMENSMSSSSSAGASSGRSSVVFHERLQQQQNLDSPNLSNDPNLHMMMGLGLSSHSSMDWNQASFMRAEKTSEMLQQETGMGLSNRGFSLDQTQFSPQYSSCSGDSNITSQQLLSSNFQMDSSSSAPLYCNTSMLQGLLGPESNNQAHQGPISNFPYSTCLNSNNNNNQLHFTNNAPFWNASEPAPVSIKDARSIFFPSLHQPFSAPSFDQQSKKNMVVLQNISEVRDSGGSMLKKSENEQSSKRPRNETPPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEATEYIKFLHEQVTVLSTPYMKSGAQTQHHQVVYNSGKSKEADGPKQDLRSRGLCLVPISSTFPVTHEPTVDFWTPTFGGTYR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1764 419 MobiDBLite consensus disorder prediction 278 292 - -
Ahy13g1764 419 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 296 345 IPR011598 GO:0046983
Ahy13g1764 419 CDD bHLH_AtbHLH_like 302 353 IPR045239 -
Ahy13g1764 419 MobiDBLite consensus disorder prediction 23 42 - -
Ahy13g1764 419 MobiDBLite consensus disorder prediction 47 67 - -
Ahy13g1764 419 PANTHER TRANSCRIPTION FACTOR BHLH123 63 409 - -
Ahy13g1764 419 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 306 363 IPR036638 GO:0046983
Ahy13g1764 419 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 63 409 - -
Ahy13g1764 419 Gene3D - 306 369 IPR036638 GO:0046983
Ahy13g1764 419 MobiDBLite consensus disorder prediction 275 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1764 Ahy-Chr13 28475860 28480122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1764 132 419 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.505 2.95e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1764 - - adu:107478336 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1764 13 28475860 28480122 Ahy13g1764 13 28475860 28480122 ECH