Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1738 ATGGGAAGTCAGAGATATATGGTTGCCGCCGCAGCGACAGTTAGCTTTTGTGTACTTTTGGTTCTTCTTGTTGTAGGAACAGTTAACTTTATAGATAAGAAGGGAACACAAGGTGTTATTAGACAATTGCTTGATCCAGCATCTGAATTGCTAGATGACAACACGGCAAAGGTACTATTAACAAAAAATGTAATTCATTTAAATAAAGAGGCAGAAGATCTCCATCTATGCGTTCGACAAGAATTGCCTGTTAACTTCAATACAATTGGTTCAGATATTCGACCATTAACACAAGCAGACATAAAAAATTTGATTAATCTTTGCCATTATCATTTCAAGGAAAAGTGCGTCTATTGTTTGAGAAAAAATAATCTTCTATTACTGCCATCGAGGGAAGATGATGATGATTCCAAGATTTGGCATGCTGCATATAGGGGACTGCATTTTTCTGGATCTAGTGCTTCCAGACAAAACTCGGGTCGAGTTTTGCTTCAGCAGATATCAGAAGCACCTAGTCCAGGACCTGCTGTTGGATCACCAACACCAAGTCTTGCACCATCCCCTGGACCCAATTTAGCACCCTCATCCGGACCTAGTCCAGCACCATCCCCTGGACCTGGTCTGGCCCCATCTTCTGCTCCGGTACCTGTTGATTCTAGACCTCTGCATCCTCCTTTGTCACCATTTTTTCCTAAACTGACACCACCAACAACATCAAATGCAGATGTTTCTGCTCCTCCATCATCGGACGCTAATAAAACCGAAGATAAGCATAGTAATAAGAAAACAGTTGTTATTGCTGTAGTTATAACTGCACTGGTGACATTGATAGGAGCAGCACTGCTCTTTATGTTCTGTGGTCGGTTTTCGAAGATTGGCCAAGGTAGAAAAAATGATGAGAGGCCACTTCTCAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTATGGATTTGGAAATTCAATGAAAGGGGAGAAACTTGGGTTCCAATCATCAAGTAATAATTTGGTTGACAACAAGAAGCCCCAGGTTCAAGAAAGTCAATCAATAGGAGCTTTTAGTGCTGCTTTGGGATCACCATTTGAAGTAAAAACTCATTCCCAGTGGACAGGAACCATGCCTTCTGGAATGCCTCCTTTAAAGCCTCCACCTGGCAAGCTGAATCCTCTCCCCCCTGAGCCTCCTTCGTTTAGGCCTTCCGGTAATGCTGCTGCTGCCGCTGCCCCTGCCCCTGCCCCTGCCCTGGCTACTCATGGACCACAACAGGTTGGTGTTGGTGGTGCTCCACGTCCTGGACCTCCACCACCACCACACCCAGCACCAGTTGGTGCCCAACATTCTCCTCCCTTCCCACCACCCCCAGCATTGGCTGCTGCCAGAGCTCATCCTCCACCACCACCTCCTGCACCAGTTGGGGCCAGACCTAGTCCTCCACCACCACTGCCCCCTGCATCAACAGGTGCGAAACCTAGTCCTCCTCCACCGCCCCCAGCTCCAGCTGGTGCCAAACCTGGTCCTCGCCCTCCGCCACCTCCGAAGGGTGGTATACCTCCTCCTCGCCCACCTCCAATCGGGGCTAGCAAACCAAAAGCTACAGAGAACGTTGAAGCTGGCACAAGTGAAGCTGATGCTCCTAAAGCCAAGCTAAAGCCATTTTTCTGGGATAAGGTTCAAGCCAACTCTGATCAATCAATGGTTTGGAATCAAATCAAGTCTGGATCATTCCAGTTTAATGAGGAGATGATAGAAACACTTTTTGGTTATAACGCTGTGGATAAAAACAATGGTCAACGAGGGAAAGAGTCTTCCGCCCAAGACCCTTCACCTCAGTATATCCAGATCATTGACAAGAAGAAAGCACAGAATTTATTAATTCTGTTGCGAGCATTGAACGTGACAATGGAAGAAGTATGTGATGCACTTTATGAAGGAAATGAGCTGCCTGCTGAGTTCCTCCAAACCTTGCTGAAGATGGCACCGACGACTGATGAACAACTTAAGCTTAGACTTTTTACTGGTGAGCTATCTCAACTTGGCCCTGCTGATCAGTTCTTGAAAGCGATGGTTGACATTCCATTTGCTTTCAAGCGAATGGAAGCACTTCTTTTCATGAGTACACTTAAAGAGGAGCTCAATTCTACTATCGAGTCTTTTGCAGTTCTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACAAGCATTTAAGCTTGATACACTCCTGAAACTATCTGATGTAAAAGGAACAGATGGCAAGACCACACTCTTACACTTTGTGGTTCAAGAGATTATCCGTTCTGAAGGCATAAAAGCTGCCAGGCTGGCAAATGTGAGTGATCTTAAAGATAGTGAAACTGGAGATCGCTACCGTGACATTGGCCTTCAGGTGGTTTCGCACTTGAGTAGCGAACTTGAGAATGTCAAGAGAGCAGCAATTCTAGATGCTGACACCTTAACTGGAACTACTGCCAAACTTGGCCATGGTCTCATGAAAACCAAAGAGTTGTTAAACAAAGATCTGAAGAATGTGGAGGAAGATAGAGGGTTTAGTGACACAATTAGACGTTTCGTGCAGAATGCTGAGACTGATGTCGTGAGACTTCTGGAAGAAGAGAAGAGAGTCATGGCTCTGGTAAAGAGCACTGGTGATTACTTTCATGGGAAGGCCGGCAAGGACGAAGGCTTACGGTTGTTTGTAATAGTAAGAGACTTCTTAATAATGGTGGACAAGGCATGCAAGCAGGTGAGAGATGCACAGAAGAAGCCTGCGAAATCTCAAAAACAAGAGACATCTCAAGGATCATCTTCCTCAGAGACTCGTCCGCCACCTTCTGATTTTCGTCAGCGGCTCTTTCCAGCAATTGCTGAAAGGAGGATAGGTGACAGTAGTTCGGATGAAGAGAGTCCATAG 2991 0.4587 MGSQRYMVAAAATVSFCVLLVLLVVGTVNFIDKKGTQGVIRQLLDPASELLDDNTAKVLLTKNVIHLNKEAEDLHLCVRQELPVNFNTIGSDIRPLTQADIKNLINLCHYHFKEKCVYCLRKNNLLLLPSREDDDDSKIWHAAYRGLHFSGSSASRQNSGRVLLQQISEAPSPGPAVGSPTPSLAPSPGPNLAPSSGPSPAPSPGPGLAPSSAPVPVDSRPLHPPLSPFFPKLTPPTTSNADVSAPPSSDANKTEDKHSNKKTVVIAVVITALVTLIGAALLFMFCGRFSKIGQGRKNDERPLLSLSMSDYSVGPSSYGFGNSMKGEKLGFQSSSNNLVDNKKPQVQESQSIGAFSAALGSPFEVKTHSQWTGTMPSGMPPLKPPPGKLNPLPPEPPSFRPSGNAAAAAAPAPAPALATHGPQQVGVGGAPRPGPPPPPHPAPVGAQHSPPFPPPPALAAARAHPPPPPPAPVGARPSPPPPLPPASTGAKPSPPPPPPAPAGAKPGPRPPPPPKGGIPPPRPPPIGASKPKATENVEAGTSEADAPKAKLKPFFWDKVQANSDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQRGKESSAQDPSPQYIQIIDKKKAQNLLILLRALNVTMEEVCDALYEGNELPAEFLQTLLKMAPTTDEQLKLRLFTGELSQLGPADQFLKAMVDIPFAFKRMEALLFMSTLKEELNSTIESFAVLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARLANVSDLKDSETGDRYRDIGLQVVSHLSSELENVKRAAILDADTLTGTTAKLGHGLMKTKELLNKDLKNVEEDRGFSDTIRRFVQNAETDVVRLLEEEKRVMALVKSTGDYFHGKAGKDEGLRLFVIVRDFLIMVDKACKQVRDAQKKPAKSQKQETSQGSSSSETRPPPSDFRQRLFPAIAERRIGDSSSDEESP* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1738 996 MobiDBLite consensus disorder prediction 952 970 - -
Ahy13g1738 996 MobiDBLite consensus disorder prediction 175 232 - -
Ahy13g1738 996 SUPERFAMILY Formin homology 2 domain (FH2 domain) 611 959 - -
Ahy13g1738 996 Gene3D Formin, FH2 domain 546 967 IPR042201 -
Ahy13g1738 996 MobiDBLite consensus disorder prediction 429 528 - -
Ahy13g1738 996 MobiDBLite consensus disorder prediction 368 545 - -
Ahy13g1738 996 SMART it6_source 541 950 IPR015425 -
Ahy13g1738 996 PANTHER FORMIN-RELATED 1 994 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Ahy13g1738 996 MobiDBLite consensus disorder prediction 978 996 - -
Ahy13g1738 996 MobiDBLite consensus disorder prediction 943 996 - -
Ahy13g1738 996 MobiDBLite consensus disorder prediction 233 250 - -
Ahy13g1738 996 MobiDBLite consensus disorder prediction 378 400 - -
Ahy13g1738 996 PANTHER FORMIN-LIKE PROTEIN 1 994 - -
Ahy13g1738 996 Pfam Formin Homology 2 Domain 543 935 IPR015425 -
Ahy13g1738 996 MobiDBLite consensus disorder prediction 169 259 - -
Ahy13g1738 996 ProSiteProfiles Formin homology-2 (FH2) domain profile. 541 961 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1738 Ahy-Chr13 27679571 27686198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1738 244 986 FH2 protein (formin) Gene Family AT5G54650 51.837 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1738 - - ccaj:109810281 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1738 13 27679571 27686198 Ahy13g1738 13 27679571 27686198 ECH
Ahy18g1080 18 16085822 16090087 Ahy13g1738 13 27679571 27686198 PCT
Ahy8g1812 8 36356916 36361103 Ahy13g1738 13 27679571 27686198 PCT
Ahy13g1738 13 27679571 27686198 Ahy18g1080 18 16085822 16090087 PCT
Ahy13g1738 13 27679571 27686198 Ahy8g1812 8 36356916 36361103 PCT