Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1718 ATGAACTCGTCCCAGTATGCATTGAGGCTTTTATTAGTTGCAATTGGTGTTGGACTTTCAGCTTTTGTAGAAGGAATGTGTTGGGCAAGAACTGCAGAGAGACAGGCTTCAAGAATGAGAATGGAATATTTGAAATCAGTGCTGAGACAAGAAATTGGATTCTTTGATAGCCAGACAGCTGGTACGTCAACAACTTACCAAGTTGTCTCACTCATCTCCTCAGATGCCAATACCATCCAAGTTGCCTTGTGTGAGAAGATACCAGACTGCTTGACATACATGTCAACATTCTTTTTCTGCCACATCTTTGCATTTGTGCTTTCATGGAGACTCACACTTGCAGCCATACCACTCTCCCTCATGTTCATAGTCCCAGCTCTCATGTTTGGGAAGATGATGTTGGATGTGACAATGAAAATGATTGAGTCTTATGGTGTTGCTGGTGGGATTGCAGAGCAAGCAATATCTTCAATAAGAACTGTTTATTCCTATGTTGGGGAGAACCAAACTCTTAACAAATTCAGCTGTGCACTTCAGAAAACCATGGAGTTAGGAATAAAGCAAGGTTTTGCAAAAGGGTTGATGTTAGGGAGCATGGGAGTTATTTATATAAGTTGGGGTTTTCAGGCTTGGGTTGGAACCATTCTTATCACTGAAAAAGGAGAAAAGGGTGGTCATGTTTTTGTGGCTGGCTTCAATGTACTCATGGGAGGGCTGAGTATTTTAAGTGCACTTCCAAATTTAACTGCCATAACAGAAGCAACTACTGCCGTCACTCGCCTTTTCGAAATGATTGATAGGGTACCATCCATAGATTCTGAAGACAAAAAGGGGAAAGCCTTGTCATATGTTAGAGGAGAAATTGAATTCAGGAACATATACTTCAATTATCCATCAAGACCAGACACACCAATCTTACAAGGACTCAATCTCACTTTTCCAGCAGGCAAGAGAGTAGGCCTTGTTGGTGGTAGTGGTTCTGGAAAATCAACAATCATTGCACTTCTTGAGAGGTTCTATGACCCTATTGAGGGAGAAATACTATTGGATGGTCACAAGATTAGTAGACTTCAGTTGAAATGGTTTAGATCCCAATTTGGCCTGGTGAATCAAGAGCCTGTTCTTTTTGCTACATCAATTAAAGAGAATATATTGTTTGGAAAAGAAGGGGCTTCAATGGAAAATGTGATAAGTGCAGCTAAGTCAGCAAATGCACATGATTTCGTTGTTCAGTTGCCAGATGGTTATGAAACTCAAGTTGGACAGTTTGGATTTCAATTATCCGGCGGACAGAAGCAGCGAATCGCCATAGCAAGAGCATTACTTAGAGATCCAAAGATTCTCCTGCTTGATGAAGCAACCAGTGCTCTGGATGCACAATCCGAAAGAGTAGTACAGGCTGCAATAGATCAAGTTTCAAAAGGAAGGACAACAATCATCATCACACACCGTTTATCGACGATACAAACGGCCGACCTCATTGCTGTCCTTCAAGAAGGCAGAGTGATTGAATTAGGCACCCATAATGAGCTGATGGACTTGACTGACGGACGAGGCGGAGCCTATGCCCGAATGGTAGAGTTGCAGCAAGTAACAGCTCAGAATGATGAACCAAGGCCTAGTTCCAATGCTCCCAAGGAGCGAAGGAGCTCACAAAGGATCAGCACTCCTCAAAGCCCTTCAGTGAGTTTCACATCAAGCACACATGGCACTCCAATGTTCACTCCCTTCAGCCAGGGACTTTCCATGGGAACTCCTTACTCCTACACAGTTCAATATGATCTGGATGATGATAGTTTCGAAGATAACCCGAAACGATTGCATCATCCGGCTCCATCACAGTGGCAATTGCTAAAGTTAAATGCTCCTGAGTGGGGTAGAGCATTGCTTGGACTCTTGGGAGCATTGGGCTCTGGAGCAGTTCAACCAATAAATGCATACTGTGTTGGATTGCTAATATCTATCTACTTTGACACTGATAACATGAAATCCAAGACTCGACGCCTGGCCCTGGTTTTCTTAGGAATTGGTGTCTTTAACTTCTTCACAAGCATCCTCCAACACTACAATTTCGCAGTCATGGGCGAAAGGTTGACTCGAAGAATCCGCGAGAAGCTTCTAGAAAAACTGATGACATTTGAGATAGGATGGTATGACCAGGAAGAGAACACCAGCGCGGCGATCTGCGCAAGACTATCTTCCGAAGCCAACTTGGTTCGATCGCTGGTAGGCGATCGGATGTCATTGTTATCACAGGCATTATTTGGTTCTCTGTTTGCGTATGCTCTAGGACTCGTGCTGACGTGGAAGCTGTCCCTTGTGATGATTGCAGTGCAGCCAATTGTCATCGGAAGCTTCTATGCAAGGAGTGTTTTAATGAAAAGAATGGCTGAAAAGGCGCGAAAGTCACAACGAGAAGGAAGCCAGCTGGCAAGTGAGGCAGTTATAAACCACAGAACAATAACCGCCTTCAGTTCTCAGAAGAGAATGATGTCACTCTTCCAATCCACTATGTTAGGCCCTAAGCAAGAGAGCATTAGGCATTCTTGGATTTCAGGTTTCGGCCTTTTCAGCTCCCAATTCTTCAACACTGCTTCCACAGCTTTAGCATACTGGTATGGTGGGAGGCTCCTTGTGAATGGTGACATTACTCCCAAGCATCTGTTCCAAGCCTTCTTGATATTGCTCTTCACTGCTTACATCATTGCAGAGGCTGGAAGCATGACAAATGACATATCTAAAGGAAACAGCGCAGTCGGATCGGTTTTCGCCATCTTGGACCGGAAAAGCGAGATTGATCCTGAGACATCATGGGGGTCAGATAAAAGAAGGAAGATTAGGGGTAAAGTTGAGCTTAAGAGTGTGTTCTTTGCATATCCAACTAGGCCTGATCAAATGATATTTAAGGGTTTGTGTCTCACAGTTGAAGCTGGGAGAACAGTGGCACTAGTAGGGCATAGCGGGAGTGGCAAATCCACCATTATTGGTCTTGTTGAGAGATTTTATGATCCTTTGAAGGGAAGTGTGTGTATAGATGAACAAGATATTGTGTCATATAATTTGAGAATGCTGAGGTCACATATTGCATTGGTGAGTCAAGAGCCAACACTTTTTGCTGGAACCATTAGAGAAAATATTGCTTATGGAAAAGAAGAGGCTACTGAATCTGAGATAAGAAGGGCTGCAGCTATGGCTAATGCTCATGAATTCATAAGTGGAATGAAAGATGGGTATGAGACATATTGTGGAGAAAGAGGGGTTCAACTCTCAGGAGGGCAAAAACAAAGAGTAGCATTAGCAAGGGCCATACTAAAGAATCCAGCAATATTGCTTCTTGATGAGGCTACAAGTGCATTGGACAGTGTGTCAGAGAATTTGGTCCAAGAAACACTTGAGAAGATGATGGTTGGACGAACATGCATTGTTGTGGCACATAGGCTATCTACAATACAAAGATCCAACTCCATTGCTGTCATTAAGGGTGGCAAGGTTGTGGAACAAGGTTCACATAATGAGTTAATTTCCCTTCATGGGGCATACTATTCTCTTATTAAACATCAAAATGCTAACTCCTCTCAATAA 3582 0.4322 MNSSQYALRLLLVAIGVGLSAFVEGMCWARTAERQASRMRMEYLKSVLRQEIGFFDSQTAGTSTTYQVVSLISSDANTIQVALCEKIPDCLTYMSTFFFCHIFAFVLSWRLTLAAIPLSLMFIVPALMFGKMMLDVTMKMIESYGVAGGIAEQAISSIRTVYSYVGENQTLNKFSCALQKTMELGIKQGFAKGLMLGSMGVIYISWGFQAWVGTILITEKGEKGGHVFVAGFNVLMGGLSILSALPNLTAITEATTAVTRLFEMIDRVPSIDSEDKKGKALSYVRGEIEFRNIYFNYPSRPDTPILQGLNLTFPAGKRVGLVGGSGSGKSTIIALLERFYDPIEGEILLDGHKISRLQLKWFRSQFGLVNQEPVLFATSIKENILFGKEGASMENVISAAKSANAHDFVVQLPDGYETQVGQFGFQLSGGQKQRIAIARALLRDPKILLLDEATSALDAQSERVVQAAIDQVSKGRTTIIITHRLSTIQTADLIAVLQEGRVIELGTHNELMDLTDGRGGAYARMVELQQVTAQNDEPRPSSNAPKERRSSQRISTPQSPSVSFTSSTHGTPMFTPFSQGLSMGTPYSYTVQYDLDDDSFEDNPKRLHHPAPSQWQLLKLNAPEWGRALLGLLGALGSGAVQPINAYCVGLLISIYFDTDNMKSKTRRLALVFLGIGVFNFFTSILQHYNFAVMGERLTRRIREKLLEKLMTFEIGWYDQEENTSAAICARLSSEANLVRSLVGDRMSLLSQALFGSLFAYALGLVLTWKLSLVMIAVQPIVIGSFYARSVLMKRMAEKARKSQREGSQLASEAVINHRTITAFSSQKRMMSLFQSTMLGPKQESIRHSWISGFGLFSSQFFNTASTALAYWYGGRLLVNGDITPKHLFQAFLILLFTAYIIAEAGSMTNDISKGNSAVGSVFAILDRKSEIDPETSWGSDKRRKIRGKVELKSVFFAYPTRPDQMIFKGLCLTVEAGRTVALVGHSGSGKSTIIGLVERFYDPLKGSVCIDEQDIVSYNLRMLRSHIALVSQEPTLFAGTIRENIAYGKEEATESEIRRAAAMANAHEFISGMKDGYETYCGERGVQLSGGQKQRVALARAILKNPAILLLDEATSALDSVSENLVQETLEKMMVGRTCIVVAHRLSTIQRSNSIAVIKGGKVVEQGSHNELISLHGAYYSLIKHQNANSSQ* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1718 1193 CDD ABC_MTABC3_MDL1_MDL2 950 1187 - -
Ahy13g1718 1193 Pfam ABC transporter transmembrane region 630 899 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy13g1718 1193 Pfam ABC transporter transmembrane region 2 238 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy13g1718 1193 CDD ABC_MTABC3_MDL1_MDL2 288 529 - -
Ahy13g1718 1193 CDD ABC_6TM_Pgp_ABCB1_D2_like 641 932 - -
Ahy13g1718 1193 Coils Coil 1112 1132 - -
Ahy13g1718 1193 ProSitePatterns ABC transporters family signature. 427 441 IPR017871 GO:0005524
Ahy13g1718 1193 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 950 1186 IPR003439 GO:0005524
Ahy13g1718 1193 Pfam ABC transporter 306 455 IPR003439 GO:0005524
Ahy13g1718 1193 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 4 1188 IPR039421 -
Ahy13g1718 1193 MobiDBLite consensus disorder prediction 547 571 - -
Ahy13g1718 1193 Gene3D ABC transporter type 1, transmembrane domain 590 937 IPR036640 GO:0005524|GO:0016021
Ahy13g1718 1193 Gene3D ABC transporter type 1, transmembrane domain 4 542 IPR036640 GO:0005524|GO:0016021
Ahy13g1718 1193 Gene3D - 278 530 IPR027417 -
Ahy13g1718 1193 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 4 1188 - -
Ahy13g1718 1193 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 629 914 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy13g1718 1193 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 288 524 IPR003439 GO:0005524
Ahy13g1718 1193 SUPERFAMILY ABC transporter transmembrane region 5 272 IPR036640 GO:0005524|GO:0016021
Ahy13g1718 1193 SMART AAA_5 315 507 IPR003593 -
Ahy13g1718 1193 SMART AAA_5 977 1169 IPR003593 -
Ahy13g1718 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 945 1187 IPR027417 -
Ahy13g1718 1193 MobiDBLite consensus disorder prediction 531 571 - -
Ahy13g1718 1193 CDD ABC_6TM_Pgp_ABCB1_D1_like 4 261 - -
Ahy13g1718 1193 ProSitePatterns ABC transporters family signature. 1089 1103 IPR017871 GO:0005524
Ahy13g1718 1193 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 253 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy13g1718 1193 Pfam ABC transporter 969 1117 IPR003439 GO:0005524
Ahy13g1718 1193 Gene3D - 940 1193 IPR027417 -
Ahy13g1718 1193 SUPERFAMILY ABC transporter transmembrane region 617 933 IPR036640 GO:0005524|GO:0016021
Ahy13g1718 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 529 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1718 Ahy-Chr13 27101190 27112976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1718 5 1193 Calmodulin-binding Proteins AT2G36910 43.024 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1718 K05658 - gmx:100788127 2006.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1718 13 27101190 27112976 Ahy13g1718 13 27101190 27112976 ECH