Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1689 ATGTCTGACAATTATTCGGATGATGACTTATACACTGTTGATTCCGGCGAATCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGAGGTTCTCCGCTTTAATTTCACAGATGTTTACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTTCAGAAGTGAAAAACGTGGTGAATTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATGCCTAACCAGCAGAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTTTGCATGGACGATGAATCAGGACGTTGGTGCGTTGCGTACTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTCCCAGGCCATCGAAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGTAAAGGAAGCATTGGCGTCTCGCGAATCCATGGTTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACAATGTATTTGGAGACGTGGTCGCATTTGATGCAACGTACAAGAAAAATGTTTACCTTTCACCTCTTGTAGTGTTCTCCGATGTGAATCACCACAACCAAACAGTTGTCTTTGCCGCTGCACTAGTGGCAGACGAGAAAGAAAAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACCTCAATGAAAGGGAAGGCTCCCGCATCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGCGATCGAGCAAGTTTTTCTAGAGGCTCACCATCGACTATGTGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCTAAATTCACCAGGATGTTTAGGGATTGCATGCTTGGCGACTACGAGGTCGGAACATTCCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGCCGATAAAATATGGGTACAAGACATGTACGAGAGAAGGTACAGTTGGGCCACAGCACACATACGAGGAAAGTTCTTTGCCGGATTTCGCACAACCTCAAGGTGCGAGGGCTTACACGCTGTGATATCACGGTATGTTAAGTCTCGATACAGTTACACTGATTTTTTATGTCATTTCCATCGATGCTTGATGTTCGTGCGTGCAAAGAAAATAGAGGCTGATTTCGAGTGTGCAAATGGTGACCCTATTATGACCACCAACCTGAAACAGTTGGAGCGGGGTGCAGCCGAGAACTACACTCGGACAATATTCTATTTGTTTGTTCACATTCTTGACAGGGCCTGTGCAATGAGGGTGGTTGATTCTGAAGACAACGGTTCGTATTTTATCCACACCGTCTCTCGATACGGCACTCCAGGGAAGGATTGGCGTGTTGTTGCAACGTCTGATATGAGCGAAGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCAAGTTCTCTGATATTGCCGAGATGGACCAAGGATCACTTCGAGAACGAACATGCAGCAGACACCAGTTTTTCACCCGAGGGGCCACCCACTGCGGGTGGCAGAGCCCCGGCACGGAATCCACCCAAGCGCAATACAAAGGGTAACGGTGATGACGGTGGAAAGAAAACCAAGCGATGTCGTTTGTGCCGCGAGGTGGGACATAATAGGACGACGTGTCCGGACCGCCGCACAATGGAGTCATCTAGCGCAGTTGCAGATGAAATGGATTCGATGGACACTGACATGCTCTATGATAACCTATCGGGGGATCTGTATGCGACTGCGGAGATTCCTTCGTTCCGATGCTCCGACAGTGACACGCAGGCTGGGTTTGTTGACAGTGACTTCGCTGGGACTAACACGTCCGGGCCAGTCATGTCTCTCGCCGATTGA 1977 0.4937 MSDNYSDDDLYTVDSGESIGWIDFLNLSEEEVLRFNFTDVYIAFEFYQQYAKHHGFGARRFRSEKRGELRIRQEFVCHRQGYRSPKFYSMPNQQKRPRAETRCGCPARMLLCMDDESGRWCVAYFSDAHNHHVLELRFSSMLPGHRRMSEADIEQMNDMRKGSIGVSRIHGFMASLAGGYHNVPYTTRDMHNVFGDVVAFDATYKKNVYLSPLVVFSDVNHHNQTVVFAAALVADEKEKTYVWLLQQLQTSMKGKAPASIITDGDRQMKSAIEQVFLEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVGTFQRKWFEMVEKFGVADKIWVQDMYERRYSWATAHIRGKFFAGFRTTSRCEGLHAVISRYVKSRYSYTDFLCHFHRCLMFVRAKKIEADFECANGDPIMTTNLKQLERGAAENYTRTIFYLFVHILDRACAMRVVDSEDNGSYFIHTVSRYGTPGKDWRVVATSDMSEVRCTCMRMECFGVPCEHIIAVLVLNNVHEIPSSLILPRWTKDHFENEHAADTSFSPEGPPTAGGRAPARNPPKRNTKGNGDDGGKKTKRCRLCREVGHNRTTCPDRRTMESSSAVADEMDSMDTDMLYDNLSGDLYATAEIPSFRCSDSDTQAGFVDSDFAGTNTSGPVMSLAD* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1689 658 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 28 531 IPR031052 GO:0006355
Ahy13g1689 658 ProSiteProfiles Zinc finger SWIM-type profile. 474 510 IPR007527 GO:0008270
Ahy13g1689 658 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 28 531 - -
Ahy13g1689 658 Pfam SWIM zinc finger 481 506 IPR007527 GO:0008270
Ahy13g1689 658 Pfam FAR1 DNA-binding domain 45 134 IPR004330 -
Ahy13g1689 658 MobiDBLite consensus disorder prediction 533 571 - -
Ahy13g1689 658 Pfam MULE transposase domain 197 291 IPR018289 -
Ahy13g1689 658 SUPERFAMILY Retrovirus zinc finger-like domains 559 594 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1689 Ahy-Chr13 26156153 26158485 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g1689 MULE 1.90E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1689 - - aip:107632754 1361.28