Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1644 ATGTCGACGGACCAAGCAATTTATGAAGAAGCATCGTACAGCACTGCATATGATGATAGTGATCAGTATAATTCTTGCGACGTTAATGTTCCATCGATTAGTGAAGATGACACACAACATGTCGACAAGGGGAAAGAATCTGTAAACATTATTCAAGTAGAGGACGATGCAATGGCAGTGAATAATGAGTTACCCGATCACACTAGAATTCCAATAGATGAAATTTCGTACGTAGGATTGAGATTTGTTTCCTTGCAGCGGGCACAAGAGTTTTATTCTAATTATGCAAAGAAAGTTGGCTTCGTGACTAGGATTAGGAATACCAACTTTGACAAGACCAGGACGGATTCAAAGATACCCATTAACCAATTGTTACACTGTAGTCGTGAAGGTTATCGGGAGTCTCGAGTGAAGGCAGCAACTCGGGTAAAGAGAATAACAACAGCTGAATGCAAAGCAAGGATGTACGTGATGCTTGATAGGCAGCAGGATAATTGGATGGTCTCCACATTAGAACTGAAGCACACCCACCTGTGTTCTACCAAGCAAGTTATGCATTACACTGAGTACAGGGAACTGACCATGCATGCCAAGTGTGTGATTCAGAACAACGATGAGGCTGGCATACGGCCCAACAAGACTTATCTCGCACTGGCGAACGAGGTTGGTGGCTCGTCGAATTTAGGTTACTCAGAAAAGGATGTGAGGAACTACATTACGAGCAATCTGCACTGTGCTGATGGAAACGCAGATGTGAAGGAAATGATTAGCTATTTCATGCGAATGAAAGATATCAACCCGAATTTCTTTTATGCAGTTGATGTAGACGAAGCTAACAAGTTTAAAAGTGTGCTCTGGGTAGATGCAAGATGCAGGGCTTCCTATGAATATTATGGTGACGTGGCATCGTTTGATACAACGTACAGTAAAAATAAGCACGGACTTCCATTTGCATCTTTTGTTGGTGTCAACCATCACGGCAAGTCCACTCTGCTCAGATGTGCTTTGCTGGAAAATGAGGAAATTCGTAGCTTTGAGTGGGCCTTTAAGCAATGGTTGAGGTGCATGGAATCTCCCCCACAGGCCATCATCACGGACCAGTGCAAATCCATGTTTGGTGCTATTAGGAATGTCCTTCCAGATACTCACCACCAATGGTGCATATGGCACATAATGAAGAAGATACCGCATAAGCTTGGAGGATATGCTCGGTACAGAGAAATAAATGATAGAATGCATGGCACTGTTTGGAATGCCAGGTCTGTGGAATCTTTCGAGAAGGATTGGTCTGCATTCATTGCTGAGTTTAACTTAGAGCAAAACAGATGGCTATCAGACCTTTATGACGAACGTCAAATGTGGGTTCCAATCTATTTTCAAGGTGAATTTTGGGTAGGTATGATAAGTACTCAACGAAGTGAGAGTATGCATGCCTTTTTCGGTGGTTACTTGCATTGCAAGAGTGGACTGGTTCAGTTCGTGCATGAGTATGACAACGTGCTTGGGAACAAGGAGCAGAAGGATCTGGAAGATGATGCTGCAGACTCTAAAGGAGTTGTCCCCTGTTCATCAAGTTCTACAATTGAAAGACAATTTCAGCGCTGCATTTCTTAA 1614 0.43 MSTDQAIYEEASYSTAYDDSDQYNSCDVNVPSISEDDTQHVDKGKESVNIIQVEDDAMAVNNELPDHTRIPIDEISYVGLRFVSLQRAQEFYSNYAKKVGFVTRIRNTNFDKTRTDSKIPINQLLHCSREGYRESRVKAATRVKRITTAECKARMYVMLDRQQDNWMVSTLELKHTHLCSTKQVMHYTEYRELTMHAKCVIQNNDEAGIRPNKTYLALANEVGGSSNLGYSEKDVRNYITSNLHCADGNADVKEMISYFMRMKDINPNFFYAVDVDEANKFKSVLWVDARCRASYEYYGDVASFDTTYSKNKHGLPFASFVGVNHHGKSTLLRCALLENEEIRSFEWAFKQWLRCMESPPQAIITDQCKSMFGAIRNVLPDTHHQWCIWHIMKKIPHKLGGYARYREINDRMHGTVWNARSVESFEKDWSAFIAEFNLEQNRWLSDLYDERQMWVPIYFQGEFWVGMISTQRSESMHAFFGGYLHCKSGLVQFVHEYDNVLGNKEQKDLEDDAADSKGVVPCSSSSTIERQFQRCIS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1644 537 Pfam MULE transposase domain 302 394 IPR018289 -
Ahy13g1644 537 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 534 IPR031052 GO:0006355
Ahy13g1644 537 PANTHER OS03G0843700 PROTEIN 60 534 - -
Ahy13g1644 537 Pfam FAR1 DNA-binding domain 90 179 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1644 Ahy-Chr13 24478544 24481041 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g1644 MULE 8.30E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1644 - - ahf:114927550 900.968