Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1637 ATGCATAACAATTACCGAAGGATGCAAAGAAATAACAACGGAATGCATCCAGCATGTGCGGCATGCAAACATCAAAGGAAGAAATGCAGTGAGAATAATTGCATATTAGCCCCTTATTTTCCAGCAAATAGAAGCCGTGAGTTCCATGCAGTGCACAAAGTTTTTGGTGTTAGCAACATAACTAAGTTAGTGAAGAGTGCAAAGGAAGAAGATCGAAGAAGAGTTGTTGACTCATTAATTTGGGAAGCATGTTGTAGGCAAAGAGACCCTATTCATGGTCCTTATGGAGAGTACACAAAAGTTTACAATGAGTATAAGAAAGTGTTTAATGAACTTAAGATATTTAGGGGCCAAAATACTAATACTAATCCTAATAATAATAATCATCATCATCAACTATTGCAAATGCCATTACCATCATCTCATCATCAAGGACTAAAATCCGTACAAGATTTGATTATGTGCAATAATAATAATAATAATACTAATAATGGGAATAAAGGGAAACACAAAGGTGAAGAAGTTGATAGTAATAATACTAATAATAACAATAATGGTAAAAACTCATTGGAATATCATCATGTTCATCATGATGAGAACAAGAATGAGATTATGGACTCTTCTACTACTATTTATAATGCATATTGTTCAAATTATTTGCATGATTTGGATAATATGATGAGGCAGGAGGTTGTCATCCCATTTCAGCAGCACTCTCAAACATACTATATTACAGGTAATCAATTCAATAATTGA 756 0.3307 MHNNYRRMQRNNNGMHPACAACKHQRKKCSENNCILAPYFPANRSREFHAVHKVFGVSNITKLVKSAKEEDRRRVVDSLIWEACCRQRDPIHGPYGEYTKVYNEYKKVFNELKIFRGQNTNTNPNNNNHHHQLLQMPLPSSHHQGLKSVQDLIMCNNNNNNTNNGNKGKHKGEEVDSNNTNNNNNGKNSLEYHHVHHDENKNEIMDSSTTIYNAYCSNYLHDLDNMMRQEVVIPFQQHSQTYYITGNQFNN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1637 251 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 9 247 - -
Ahy13g1637 251 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 247 - -
Ahy13g1637 251 Pfam Lateral organ boundaries (LOB) domain 18 114 IPR004883 -
Ahy13g1637 251 ProSiteProfiles LOB domain profile. 17 119 IPR004883 -
Ahy13g1637 251 MobiDBLite consensus disorder prediction 160 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1637 Ahy-Chr13 24275216 24277967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1637 16 106 AS2 family AT1G06280 61.538 1.42e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy13g1637 LOB 1.10E-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1637 13 24275216 24277967 Ahy13g1637 13 24275216 24277967 ECH