Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1628 ATGGAATCCAATGATGGTGAGGATCATTCTCAAAAATTGCTTTTAGCTCAAACCCACATATGGAATCACTTTTTTAGCTTCATAAATTCTATGTCCCTTAAATGTGCAATTGAACTGAACATACTTGATGTTGTTCACAATTATGGCCAACCCATGCCACTCTCAGAACTCATTGCTTCATTACCAATCCAACCGTCAAAAGCCGCCTTCGTCCCCCGCTTGATGCGAATCTTGACACTTTCCGGCTTCTTCTCGAATCAAAATGATGATGATCAACAAGAAGAGAGGTATGTTCTAACTAATTCATCTAGACTATTGCTAAAGGATCACCCCTTTTGCATGACACCATTCCTGGATGTACTTCTTGATCCAAATTTGGTAAAACCATGGTACCAACTCTCTAATTGGTTCAAGAAATGTGACACTAACAAGTCACCATTAGAAATGGAACATGGGAGGGCATTTTGGGAATTTGCTAGTCATGACCAAAAGCTTAGTAATAGTTTCCATGAGGCCATGACAAGCGACTCTAGATTGATTGCTAGTGTGGTGATTGAGAAGTGTAAGGATACTTTTGAAGGGTTGGAATCTTTGGTTGATGTTGGTGGGGGCAATGGAACTATGGCTAAGGCCATAGCTAAATCATTCCCAAATGTGGAGTGCATTGTGTTTGATCTTCCACATGTTGTTGCTGGCTTTCAAGGAAGTAGTGACAAGAACATCAAATATGTTGGAGGGGACATGTTTGAGGCAATTCCTTCTGCAGATTCTGTTTTGTTGAAGTGCATATTACACAACTGGAGTGATGAGGATTGTGTAAAACTCCTGAAGAAATGCAAGGAGGCAACAATGAAGAAGGGCAAAAAAGGAAAAGTGATAATAATAGACATGGTGGTAGGGAATGAGAATGGAGATAATGGATCACTGGAGACACAACTTTATTATGATATGGCGATGATGGCCTTTGTCACTGGAAAGGAGAGAACTGAGAAAGAATGGGCCAAGCTATTTTTCTCTTCTGGTTTCAGTAATTACAAGATAATTCCAATTTTGATGAGTTCAAGGTCTTTGATCGAGGTTTATCCATAG 1089 0.3985 MESNDGEDHSQKLLLAQTHIWNHFFSFINSMSLKCAIELNILDVVHNYGQPMPLSELIASLPIQPSKAAFVPRLMRILTLSGFFSNQNDDDQQEERYVLTNSSRLLLKDHPFCMTPFLDVLLDPNLVKPWYQLSNWFKKCDTNKSPLEMEHGRAFWEFASHDQKLSNSFHEAMTSDSRLIASVVIEKCKDTFEGLESLVDVGGGNGTMAKAIAKSFPNVECIVFDLPHVVAGFQGSSDKNIKYVGGDMFEAIPSADSVLLKCILHNWSDEDCVKLLKKCKEATMKKGKKGKVIIIDMVVGNENGDNGSLETQLYYDMAMMAFVTGKERTEKEWAKLFFSSGFSNYKIIPILMSSRSLIEVYP* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1628 362 PANTHER ORCINOL O-METHYLTRANSFERASE 6 362 - -
Ahy13g1628 362 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Ahy13g1628 362 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Ahy13g1628 362 Pfam O-methyltransferase domain 130 343 IPR001077 GO:0008171
Ahy13g1628 362 Gene3D Vaccinia Virus protein VP39 108 362 IPR029063 -
Ahy13g1628 362 Gene3D - 2 106 IPR036388 -
Ahy13g1628 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Ahy13g1628 362 PANTHER O-METHYLTRANSFERASE 6 362 IPR016461 GO:0008168
Ahy13g1628 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 362 IPR016461 GO:0008168
Ahy13g1628 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 360 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1628 Ahy-Chr13 23935234 23938244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1628 31 348 Monolignol Biosynthesis Gene Families AT5G54160 33.642 3.19e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1628 - K16040 gmx:100807238 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1628 13 23935234 23938244 Ahy13g1628 13 23935234 23938244 ECH