Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1627 ATGGAATCCAATGGTGTAGACTATGCTTCCAAATTGCTTGAATCTCAAAGCCATGTATGGCACCACATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGACTTGGGAATTCCAGATGCCATACACAACCATGGCCAACCCATGCCACTCTCAAAACTCATTTCTTCTCTACAAATCCATCCCAACAAAACACAATACATCCACCGCTTGATGCGGATTTTGACTCATTCTGGCTTTTTCTCTAAACAAATCTCTTCCAAAGGCGATCCAGAATCGAGTTATTCCCTAACCGATGCATCTAAGTTGTTGCTCAAAGACAATCCTATGAGTCTTTTTCCTTTCTTGTCTGCCATGCTTGATCCCATTTTAACAAAGCCGTGGTACGATTTACCGGCATGGTTCAAAAACGATAGTCCCACATCGTTTTACATGAGGCATGGGATGGCACTTTGGGAATATGCTGGTGTTGAGCCAAGACTCAACAAGTTCTTCAATGATGCCATGGAAACCGATACTCCATTTATTTCAAGTATTTTGTTTGACAAGTGTAAGGGTGTGTTTGAAGGGTTGGAGTCTTTGGTTGATGTTGGTGGAGGCACAGGAACTATGACTAAGGCTATTGCTAAGGCATTTCCACAAATGGAGTGTGTTGTGTTTGATCTTCCACATGTTGTTGATGGCTTGCAAGGAAGTGGGAATCTCAAATATGTTGGAGGTGATATGTTTGACTCAATTCCTCCTTCAGATGCCATTTTCTTGAAGTTTATATTGCATGACTGGAATGATGAGAAATGTATCAAAATACTGAAGAAATGCAAAGAAGCAATCACAAGAAGCAAAGGAAGAAAAGGGAAAGTTATTGTCATTGATATGGTAGTGGATGATGAAAAGAGTGATGGATATAATAAATCAATTGAAACCCAACTTTTCTTTGATATGTTGATGATGGTAGAAGTCAACGGAAAAGAGAGAAATGAAAAAGAATGGGCAAACTTAATTTTCTCAGCTGGTTTTAGTAGCTACAAGATAAACTTATCAGCTTTGGGATTAAGATCTCTCATTGAAATCTTTCCATAA 1086 0.3895 MESNGVDYASKLLESQSHVWHHIFSFINSMSLKCAIDLGIPDAIHNHGQPMPLSKLISSLQIHPNKTQYIHRLMRILTHSGFFSKQISSKGDPESSYSLTDASKLLLKDNPMSLFPFLSAMLDPILTKPWYDLPAWFKNDSPTSFYMRHGMALWEYAGVEPRLNKFFNDAMETDTPFISSILFDKCKGVFEGLESLVDVGGGTGTMTKAIAKAFPQMECVVFDLPHVVDGLQGSGNLKYVGGDMFDSIPPSDAIFLKFILHDWNDEKCIKILKKCKEAITRSKGRKGKVIVIDMVVDDEKSDGYNKSIETQLFFDMLMMVEVNGKERNEKEWANLIFSAGFSSYKINLSALGLRSLIEIFP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1627 361 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Ahy13g1627 361 Pfam O-methyltransferase domain 130 342 IPR001077 GO:0008171
Ahy13g1627 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 351 IPR029063 -
Ahy13g1627 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Ahy13g1627 361 PANTHER ORCINOL O-METHYLTRANSFERASE 7 361 - -
Ahy13g1627 361 Gene3D - 2 106 IPR036388 -
Ahy13g1627 361 Gene3D Vaccinia Virus protein VP39 107 361 IPR029063 -
Ahy13g1627 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
Ahy13g1627 361 PANTHER O-METHYLTRANSFERASE 7 361 IPR016461 GO:0008168
Ahy13g1627 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1627 Ahy-Chr13 23885555 23887877 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1627 30 360 Monolignol Biosynthesis Gene Families AT5G54160 34.125 9.03e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1627 - K16040 gmx:100781008 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1627 13 23885555 23887877 Ahy13g1627 13 23885555 23887877 ECH