Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1611 ATGGAGGGTGGTGGTTCAGAAGAAGAGAAGAGGAAGGAGAAGCCAGCGGAGGTTGAGAACAAGATCAAGCGCAGAATGAAGACTGCTTTTCAGTTGGAAGTTCTGGAGAAAACTTATGTTGGGGAGGCTTACCCTTCAGAAGCAGTGCGAGCTGAGTTATCTGCGAAGCTGGGTCTGTCTGATCGTCAACTGCAAATGTGGTTTTGTCACCGGAGGCTGAAGGATAGGAAATCAGCACCAACAGCGAAGAAGCCCCGAAATGATCACCCGCCTGTGGCACCGGATTCAGTGCCCGAAGGAGAGGGTCTTGAGCAAATGGCAGTGGCTGATGCCATGCATGATTGTGGTTTAGCTTCTGGGTTGAAGCCATTTGGATATTCGGATCCGAGGCGAGTTGTTCCAAATCCTTCGATTTCCTTTACTGGAAGAGGAGCTGGATTGCCAACAATGGAGAACAATAGTTACTATGAACCACATCAGGCCATCGAGGTGCTGCGAGCAATTACATTTGTGGAGAGACAGTTGGGTCAGCCATTAAGAGAGGATGGACCAATTCTGGGAATGGAATTTGATTCCTTGCCCCCAGGGGCATTTGGTGCCCCAATAGAGGAAGTGACACTGGGACAGCATAGGCATTCTGGAAGCCCTTTCGAGGCAAAAATTTATGATCAACGAAACAAGGGCATTCCAAGGACTCTCCACGAGTATCAATTTATTCCAGAGCAGCTAACTGTTAGAAATGAGACATTTGACAGAGTTGCCCCCACTATCCATTACAGTTCTCCTGATGGCATTTCACATTCCAGGACTTTACTACCTAGCCAGAAATCTTTGCTTGGTGGGAATGAATCTACACCATATGGATATGGAGTTCAAGATCAGATGCCTGCTTTGAATCATTTGTCTCAGCATGTCAGGCAGAATCATGTTTTGCCTTCTGCTTCTGGACAGATTGAGGGTATTCCACGAAAGAACACATTTGTTGATGTAACAGTTGTTACTCATAGTGGGGTTCACCCAATAACTCTGACCGACACTGCACTAGTGCCATCTGACAACACGGTTATCCATGAGGAGGAACCTTCAAGGCTTCAGAGGAAGCGAATGAATGAAGAAGCTAGAATACGACGTGAACTTGAAGCTCATGAGAAAAGAGTTAGAAAAGAGATTGAAAAACAGGATATTCTAAGGCGAAAGAGGGAAGAGCAAATAAAGAAAGAGATGGAGAGGAATAACCGTGAAAGGCGGAAAGAAGAAGAAAGGTTGTTACGTGAAAGACAGCGAGAGGAGGAGAGGTACCAAAGAGAACAGAGGCGTGATCTGGAGCGTAGGGAGAAGCTTTTACAGAAAGAATCAATAAGAGCTGAGAAACTGAAACAGAAGGAAGAACTACGCAGGGAGAAAGAGGCAGCAAGGATCAAAGCTGCTTATGAGAGAGCTCTTGCCCGCAGAATGACCAGAGAATCAATGGGACTTATTGAAGATGAACGTCTGGAACTCATGGAACTAGCTACATTGAAGAAGAGACTTCCTTCGATACTGGCTCTTGATTATGAAACTATGCAAAATCTCGAGTTATATAGAGATGGGCAAACACCATTCCCACCCGAGTCTGTGCAGTTGAAAAAACCATTTTCAATCCAACCTTGGTCAGACTCTGAGGAGAAAACAGGAAATCTTCTCATGGTTTGGAGGTTCTTGAATACTTTTGCTGATGTTCTTGGAATATGGTCGTTTACCTTGGATGAACTTATTCAAGCTTTCCATGACTATGATCCAAGGTTGTTAGGTGAGATTCATATTGCTCTTTTGAGATCTATTATGAAAGATATTGAAGATGTTGCAAGAACTCCCTCCACTGGATTAGGAGGTAACCAAAACAATGTTGCCAATTATGGTGGGGGGCATCCTCAAGTAGCTGAAGGGGCATATGTGTGGGGTTTTGATATAAGAAATTGGCAACGGCATTTAAATCCATTAACATGGCCTGAAATTTTGCGGCAGTTTGCTTTGTCAGCTGGATTTGGCCCAAAATTGCAGAGACATAGTGAATCGGTGCATCCTTGTGATAACAATGAGGGTCATGATTGTAAAGACATAATCTCTCATCTACGCAGTGGAGCTGCAGTAAAAAATGCAGTTGCTATCATGCAAGAGAAGGGATTATCTAAGCCAAGTAGATCAAGACATCGCTTGACTCCTGGAACTGTTAAATTTGCTGCATTTCACGTCCTTTCTGTTGAAGGGAGCAATGGCCTCAATATATTGGAAGTTGCAGAGAAAATTCAGAAATCTGGGCTCCGTGATCTTACAACAAGCAAAACTCCAGAGGCTTCTATATCTGCTGCATTGTCTAGAGACACAAAGCTATTTGAAAGGATAGCTCCTTTGACGTATTGTGTACGTCCTGCATATCGAAAGGATCTGTCTGATGCTGAAGCAATTTTTTCAGCTGCCAGGGAAAGAATCAGGATATTCAAAAGTGGATATATGGATGCTGGTGAAGCAGAAGAGGGGGGAAGAGAAGATGATTCTGAAAGTGATGTAGCAGAAGATATTGAAACTGATGATTTAGGAGCTGAAACTAATATAAAAAATGGGGGTTTCAGTTCTGTAGAATTTAATTCAGAAACCGTAATGAGAATTAGAAAGGACACTGGTAAGGTTTCTCAAACACTTGGTTGCTATGACCATGAGAAACTGGATGAGGATATACTGTCAATTGTTTCTGAAGGCATTGATATGCACAAAGGGATTAGTGCCTCTTGTGATATTGCTGTTTGCAGCAATGATGTGTCTAATCCTAATCTTGAAGGTATGGATATTGATGAAAGCATTCCAGATGAGTCGTGGGTACAGGGGTTGATGGAAGGAGAGTACTCTGACCTCAGTGTTGAGGAGCGTCTTAATGCTCTCGTTGCTTTGGTTAATGTGGCAATTGAAGGGAACTTAATTCGTGTTACACTTGAGGATCGTCTAGAAGCTGCAAATGCTTTAAAGAAGCAGATGTGGGCAGAAGCACAGCTGGGTAAACGTCGTATCAAAGAGGACTACTTTGTTAAGATGCATCCTGTATCTAATTTCAGCAACAGGAGTGAATCAAATAGTGCATTTCCATCACTTGAGGACAAACAGAAGCCATTCCTTTCTGTTGATAACAAGAATGACGAGGCTTTATTAACCCCTCTTGGCCGGTGCAATCAGATCAACGAACTACTGGAAAATCCAAATCATATTGAGAGTTCCTCATTAGAAGTTAGCCACCAGCTCCATCAAAGTTCTGCTAACCAAGATAATTATTCTCTTCAACAATTTGGATTTGCTCCTGAAAAATCAAGGTCAAATATAAAATCTTACATTGGTTACTTGGCAGAACAAACCTACATGTATAGGACATTGCCTCTTGGCTTGGATCGCAGACATAACCGATACTGGCAGTTCATTGCATCTGCTTCTCCAAATGATCCTGGTTGTGGCAGGATTTTTGTGGAGTTGCATGATGGTTGTTGGAAATTGATTGATTCTGAAAAGGGATTTGATTCCCTATTGGGTTCGTTGGATGTACGTGGGATCAGGGAGTCACACTTGCATATGATGTTGCAAAGTATTGAGATGGCGTTCAAGGAATCTATTAGAAGGAATGTCCATAATGGTGATGCAAGAATGGAGAATGGGGACACTGTCAAGAGGCTCAAGACAGAAGCTTTTGAAGTGGATACGAACAATTATTGTAGTGATATTCACCATCCTACATCTGTGTGCATCGATAATTCAGATGCTTCAGAGGTCTCGACATCTTTTGCAGTTCAGCTTGGAAGAAATGAAGCTGAAAACAGGGATGCTCTTCTGAGATATCAGGACTTTGAGAAATGGATGCTAAATGAATGCCTAAATTCGTCAATATTATGTGCCTTGAAGTTTGGGAAGAGGAGGCGTAGCAAACTGTTGACTGTGTGTGATTCATGTCATGATGTTTATTTCTTTGATAGAATCAAATGCCCTTCCTGCAATAGAACTCTCAATGCTCACGGCAAGGCAAAGATTGACACTGATTATTTTCATGTTTCATCTTATCTTCCTTTGAGAATGAGATTGCTGAAGGTCTTATTGTCAATTGTTGAGGTTTCAGTTCCCGAAGAAGCTTTTCACGGTATTTGGACCAACAGTTATAGGAAATCATGGTGTACAAAACTGGATGCTTGCTCATCAACTGAAGACCTCCTGGAGATATTAACTGTATTAGAAAGCGCTATAAAGAGGGAGTATTTGGATTCAAACTATGAAACTACCTCTGAGCTGCTGGGTTCGAGAAGTTCTTCTGGATGTCCTCCAACTAATGATTTTGTAGGTGCTGAAAGGATACTTCCATGGGTGCCGTGCACAACAGCTGCGGTGGCTCTGAGACTCATGGAACTCGATGCATGCACCTCTTACACCTTTCAGCAGAAGATGGAGTCTGAAAAGGATAAAAGAATTGGAATTGTTATGAAGCTTCCGACAAAATATGCTTCTGCCAAATCATCTTGCCGTGATAGTGCAATTGAAGAAAGAGGACAAACGTCCCAACAGGGACAAAGATCCCGGCAGGGACAAAGCATGCATAAGGTTAAGCATACTGTTGAAAACATGGTTGGTCTTGGTGCTGGCCTTGCAAGCTACAGCAGAGGACAAAGGTCCCGACAGGGCCGGAGCCATTCTTGTGCGAGTGGGAGATCACAAGGACGGGTTCTTAGTTCAAGACATGATTCTAGAAAGAGAAGCACGACCTCTAGCAGCATGAGAATAGGAAATTTACTTGGATGGAAAGGGAGATCATGTAGGCATGCAGAACAAAATGTACGTGCTCGTCGGAGTGTTCGAAGTAGACAGAAACCGGCTGTCAAGGTCTGTGTCACTGGTGTTGAGAAGGACACTCCAGATGATATCACAGGGTATACAGCTGGTATCTTTATCAATGAAAAGATGAATGGAAGTGAAGTGGAAGCTGCTGCTAGAAGTGCTAGCAGCTCAGAAAAATTGGCCTATGAAAATGATATTTATCAGTCAACAGTTGATGCGTATGAATATCTAATTGATGATAATAATGATGGATATGAGGGTGGATTTAGTGGAAAATCTGAGAACTTTGTAGAGGGGAGCAACCATAATGTGGATGATGATGAAAATGAGGACGTTGATGACAATGATGATGAAGACGGACAAGTTGATGTTGAAGATTATATAAGCCACAAATCAGATACTGACGCCGGAGAAAATGCCGACCAGAACATGGATCCTAATGGAACAGATTCAACCTCATCAGAGTCCAGTGATTAA 5316 0.4272 MEGGGSEEEKRKEKPAEVENKIKRRMKTAFQLEVLEKTYVGEAYPSEAVRAELSAKLGLSDRQLQMWFCHRRLKDRKSAPTAKKPRNDHPPVAPDSVPEGEGLEQMAVADAMHDCGLASGLKPFGYSDPRRVVPNPSISFTGRGAGLPTMENNSYYEPHQAIEVLRAITFVERQLGQPLREDGPILGMEFDSLPPGAFGAPIEEVTLGQHRHSGSPFEAKIYDQRNKGIPRTLHEYQFIPEQLTVRNETFDRVAPTIHYSSPDGISHSRTLLPSQKSLLGGNESTPYGYGVQDQMPALNHLSQHVRQNHVLPSASGQIEGIPRKNTFVDVTVVTHSGVHPITLTDTALVPSDNTVIHEEEPSRLQRKRMNEEARIRRELEAHEKRVRKEIEKQDILRRKREEQIKKEMERNNRERRKEEERLLRERQREEERYQREQRRDLERREKLLQKESIRAEKLKQKEELRREKEAARIKAAYERALARRMTRESMGLIEDERLELMELATLKKRLPSILALDYETMQNLELYRDGQTPFPPESVQLKKPFSIQPWSDSEEKTGNLLMVWRFLNTFADVLGIWSFTLDELIQAFHDYDPRLLGEIHIALLRSIMKDIEDVARTPSTGLGGNQNNVANYGGGHPQVAEGAYVWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPKLQRHSESVHPCDNNEGHDCKDIISHLRSGAAVKNAVAIMQEKGLSKPSRSRHRLTPGTVKFAAFHVLSVEGSNGLNILEVAEKIQKSGLRDLTTSKTPEASISAALSRDTKLFERIAPLTYCVRPAYRKDLSDAEAIFSAARERIRIFKSGYMDAGEAEEGGREDDSESDVAEDIETDDLGAETNIKNGGFSSVEFNSETVMRIRKDTGKVSQTLGCYDHEKLDEDILSIVSEGIDMHKGISASCDIAVCSNDVSNPNLEGMDIDESIPDESWVQGLMEGEYSDLSVEERLNALVALVNVAIEGNLIRVTLEDRLEAANALKKQMWAEAQLGKRRIKEDYFVKMHPVSNFSNRSESNSAFPSLEDKQKPFLSVDNKNDEALLTPLGRCNQINELLENPNHIESSSLEVSHQLHQSSANQDNYSLQQFGFAPEKSRSNIKSYIGYLAEQTYMYRTLPLGLDRRHNRYWQFIASASPNDPGCGRIFVELHDGCWKLIDSEKGFDSLLGSLDVRGIRESHLHMMLQSIEMAFKESIRRNVHNGDARMENGDTVKRLKTEAFEVDTNNYCSDIHHPTSVCIDNSDASEVSTSFAVQLGRNEAENRDALLRYQDFEKWMLNECLNSSILCALKFGKRRRSKLLTVCDSCHDVYFFDRIKCPSCNRTLNAHGKAKIDTDYFHVSSYLPLRMRLLKVLLSIVEVSVPEEAFHGIWTNSYRKSWCTKLDACSSTEDLLEILTVLESAIKREYLDSNYETTSELLGSRSSSGCPPTNDFVGAERILPWVPCTTAAVALRLMELDACTSYTFQQKMESEKDKRIGIVMKLPTKYASAKSSCRDSAIEERGQTSQQGQRSRQGQSMHKVKHTVENMVGLGAGLASYSRGQRSRQGRSHSCASGRSQGRVLSSRHDSRKRSTTSSSMRIGNLLGWKGRSCRHAEQNVRARRSVRSRQKPAVKVCVTGVEKDTPDDITGYTAGIFINEKMNGSEVEAAARSASSSEKLAYENDIYQSTVDAYEYLIDDNNDGYEGGFSGKSENFVEGSNHNVDDDENEDVDDNDDEDGQVDVEDYISHKSDTDAGENADQNMDPNGTDSTSSESSD* 1772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1611 1771 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 1771 IPR044977 GO:0006357
Ahy13g1611 1771 CDD homeodomain 21 78 IPR001356 GO:0003677
Ahy13g1611 1771 SUPERFAMILY Homeodomain-like 19 77 IPR009057 -
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 409 439 - -
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 1698 1771 - -
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 1553 1594 - -
Ahy13g1611 1771 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1131 1203 IPR028941 -
Ahy13g1611 1771 Pfam Homeodomain 23 77 IPR001356 GO:0003677
Ahy13g1611 1771 ProSiteProfiles 'Homeobox' domain profile. 18 78 IPR001356 GO:0003677
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 1752 1771 - -
Ahy13g1611 1771 SMART testlast3 554 613 IPR018501 -
Ahy13g1611 1771 ProSiteProfiles DDT domain profile. 554 613 IPR018501 -
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 1717 1736 - -
Ahy13g1611 1771 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 7 1771 - -
Ahy13g1611 1771 Coils Coil 372 474 - -
Ahy13g1611 1771 ProSiteProfiles HARE-type HTH domain profile. 735 804 IPR007759 GO:0006355
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 1554 1576 - -
Ahy13g1611 1771 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 948 986 IPR028942 -
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 75 99 - -
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 1514 1530 - -
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 1508 1535 - -
Ahy13g1611 1771 Pfam DDT domain 556 610 IPR018501 -
Ahy13g1611 1771 SMART HOX_1 20 82 IPR001356 GO:0003677
Ahy13g1611 1771 Gene3D - 11 91 - -
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 75 90 - -
Ahy13g1611 1771 Pfam HB1, ASXL, restriction endonuclease HTH domain 735 802 IPR007759 GO:0006355
Ahy13g1611 1771 MobiDBLite consensus disorder prediction 1737 1751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1611 Ahy-Chr13 23484331 23500112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1611 1 1490 Homeobox Transcription Factor Family AT5G44180 48.505 0.0 1274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Ahy13g1611 WSD 4.40E-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1611 - - gmx:100797480 2031.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1611 13 23484331 23500112 Ahy13g1611 13 23484331 23500112 ECH