Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1610 ATGGGTGTGGATTATTACAAGATCTTGCAGGTTGATAAGAATGCAAAGGATGAAGACTTGAAGAAGGCTTATAGGAAACTTGCCATGAAGTGGCACCCTGATAAGAACCCCAACAACAAAAAAGATGCTGAAGCTAAGTTCAAGCAGATTTCTGAAGCCTACGAGGTTCTTAGTGATCCTCAGAAGAGAGCTATCTATGACCAGTATGGGGAGGAGGGGCTTAAGGGACAGGTACCCCCTCCTGATGCCGGTGGACCTGGTGCAGGTGCTGGAACTACTTTCTTTTCGACCGGAGATTTCCCAGGAGGATCATTTCGGTTCAATCCCCGGAGTGCAGACGACATTTTTGCAGAATTCTTTGGGTTTTCAAGCCCGTTTGGTGGCTCCGGTGGGAGAGGAAGTGGCATGAGGTCGAGAGGATTTTCTAGTGGAATGTTTGGAGATGATATGTTTGGATCCTTTGGCGAAGGAGGAGGGGTGCATGTGAGCCATGGGGCGCCTCGCAAGGCGGCTACCATTGAGAACAAGTTGCCCTGTACCCTGGAGGAGATATACAGAGGGACCACCAAGAAGATGAAGATTTCTAGAGAAATTGTGGATGCTAGTGGGAAAACCATGCCGGTAGAGGAGATATTGACCATCAACGTGAAGCCTGGTTGGAAGAAGGGCACGAAGATCACCTTCCCGGAGAAGGGAAACGAACAGGTGAACGTGACGCCAGCAGACCTCGTCTTCGTCATCGAAGAAAAGCCGCACGGCGTCTTCACTCGTGACGGAAACGATCTCATCGTGACGCACAAGATCACCCTCGTGGAAGCCTTGACCGGTTACACAGTGCGCCTCACCACACTGGATGGCAGAACCTTAAACATACCAATCAACACCGTGATTCATCCCAACTATGAGGAGCTTGTACCGAGAGAAGGCATGCCATTACCAAAGGATCCATCAAAGAAGGGCAACTTGAGAATAAGATTCAACATCAAGTTCCCAACCAGGCTCACTGATGAACAGAAATCAGGAATTAGGAAACTCTTGCCTGCATCAGCATCAGAATAA 1059 0.491 MGVDYYKILQVDKNAKDEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDAGGPGAGAGTTFFSTGDFPGGSFRFNPRSADDIFAEFFGFSSPFGGSGGRGSGMRSRGFSSGMFGDDMFGSFGEGGGVHVSHGAPRKAATIENKLPCTLEEIYRGTTKKMKISREIVDASGKTMPVEEILTINVKPGWKKGTKITFPEKGNEQVNVTPADLVFVIEEKPHGVFTRDGNDLIVTHKITLVEALTGYTVRLTTLDGRTLNIPINTVIHPNYEELVPREGMPLPKDPSKKGNLRIRFNIKFPTRLTDEQKSGIRKLLPASASE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1610 352 Gene3D - 252 332 - -
Ahy13g1610 352 MobiDBLite consensus disorder prediction 72 93 - -
Ahy13g1610 352 PRINTS DnaJ domain signature 62 81 IPR001623 -
Ahy13g1610 352 PRINTS DnaJ domain signature 42 62 IPR001623 -
Ahy13g1610 352 PRINTS DnaJ domain signature 6 24 IPR001623 -
Ahy13g1610 352 PRINTS DnaJ domain signature 24 39 IPR001623 -
Ahy13g1610 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 254 340 IPR008971 GO:0006457|GO:0051082
Ahy13g1610 352 CDD DnaJ 4 59 IPR001623 -
Ahy13g1610 352 Gene3D - 171 250 - -
Ahy13g1610 352 Pfam DnaJ domain 4 67 IPR001623 -
Ahy13g1610 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 174 252 IPR008971 GO:0006457|GO:0051082
Ahy13g1610 352 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Ahy13g1610 352 Gene3D DnaJ domain 3 130 IPR036869 -
Ahy13g1610 352 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Ahy13g1610 352 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 346 - -
Ahy13g1610 352 CDD DnaJ_C 171 334 - -
Ahy13g1610 352 Pfam DnaJ C terminal domain 173 331 IPR002939 -
Ahy13g1610 352 SMART dnaj_3 3 62 IPR001623 -
Ahy13g1610 352 SUPERFAMILY Chaperone J-domain 3 105 IPR036869 -
Ahy13g1610 352 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1610 Ahy-Chr13 23482116 23483973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1610 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.85e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1610 K09510 - gmx:100778672 522.316