Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1583 ATGGGTTTGCTTTCATCTTCTTATTCTTCTTCTTCTTTCACCACTTTTGTTCTATTCCTCTTTCTTGTACAATTATCTTGCTTCTTCAAAAACCTTAATGCAAAGCATAGTGTGGCCAATGGTCAGAACCGGGGTGGCCACCATCACCACCACAACACCCGGAATCCGAGGCTTGATGGCGCCTTTCTTGCGCTGCAAGCATGGAAGAGTGTCATCTATTCCGACCCAAAAAACTTCACTGGCAACTGGGTAGGTCCTAGAGTTTGCAATTACACAGGTGTGTATTGTGCTCCATCACAAGATGACCCTAAAGTGACAGTTGTAGCAGGCATTGACCTTAACCACGGCGACATAGCCGGCTTCCTACCGGCCGAATTAGGCCTGCTTTCAGACCTTGCTCTGCTCCATCTCAACAGCAACCGCTTCTGCGGCATCCTCCCAAGAACACTAAGCAACCTCAGTCTCCTTCACGAGCTTGATCTTAGCAACAACAGATTTGTTGGACCTTTTCCAACGGTTGTTCTTTCCCTTCCTTCCCTCAGATACCTTGACATTCGGTTCAACGAATTCGAAGGCTCATTGCCTGTTGATCTCTTTAACAAAACCTTTGATGCAATATTTCTCAATAACAACCGTCTTAGCAGTTCCATCCCACGAAGCTTCGGCCGAATCTCGGCCTCTGTCCTGGTTTTCGCCAACAACAGATTCGGAGGCTGTCTTCCAGAAAGCATAGTAAACTTAGCTGAAACACTGGAAGAGCTTGTCATGATCAACACCAGTTTACAAGGTTGTTTGCCACAGCAAGTTGGATTTCTCTACAAATTAAGAGTATTTGATGTTAGTTTCAACAAAATTGTTGGCCCAATTCCTTATAGCCTTGCAGGGCTTTCTCATTTGGAGCAGCTCAATTTGGCACACAATATGATGACCGGCATAGTCCCTATGGGAGTTTGTGAGCTTCCCAACTTGGCCAATTTCACATTTTCTTATAACTTCTTCTGCGAGGAAGAGGGAATTTGCCGGAACTTGACATCAAAAAGAACTGTCTTTGATGATCGCCGCAACTGTTTGCCGGAGAAACCGCTACAGAGGAGCAAGAAGGAGTGCAATGCTGTAAATCAGAACCCTGTTGATTGCATAAAACTTTGTTGTACCACAGAAGGTGGTTTTGGAAACAATGTCACAAGTTCTAGCTCAATGCCAACAATGCCTATTTCTGCACCTCCTTTTATTGCACCAAGCCACCCATGA 1251 0.4516 MGLLSSSYSSSSFTTFVLFLFLVQLSCFFKNLNAKHSVANGQNRGGHHHHHNTRNPRLDGAFLALQAWKSVIYSDPKNFTGNWVGPRVCNYTGVYCAPSQDDPKVTVVAGIDLNHGDIAGFLPAELGLLSDLALLHLNSNRFCGILPRTLSNLSLLHELDLSNNRFVGPFPTVVLSLPSLRYLDIRFNEFEGSLPVDLFNKTFDAIFLNNNRLSSSIPRSFGRISASVLVFANNRFGGCLPESIVNLAETLEELVMINTSLQGCLPQQVGFLYKLRVFDVSFNKIVGPIPYSLAGLSHLEQLNLAHNMMTGIVPMGVCELPNLANFTFSYNFFCEEEGICRNLTSKRTVFDDRRNCLPEKPLQRSKKECNAVNQNPVDCIKLCCTTEGGFGNNVTSSSSMPTMPISAPPFIAPSHP* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1583 416 Pfam Leucine rich repeat 132 189 IPR001611 GO:0005515
Ahy13g1583 416 PANTHER EXTENSIN-LIKE PROTEIN 8 415 - -
Ahy13g1583 416 SUPERFAMILY L domain-like 63 349 - -
Ahy13g1583 416 Gene3D Ribonuclease Inhibitor 62 351 IPR032675 -
Ahy13g1583 416 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1583 Ahy-Chr13 22993407 22994752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1583 55 408 Trihelix Transcription Factor Family AT2G15880 52.542 3.63e-136 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1583 - - adu:107478209 759.985