Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1564 ATGATCTCTTTTGCAACAATAACAACAATAATGTCTTCCCTTCTCATATATCTCTTCCTTCTGAGAATAACCTTAGTTTCTTCGTCAACAGAATTTGTCTACAACACCAACTTCAACTCCACCAACATAAATCTCTATGCAAACGCCACTATTGATGATCACTCTCACTCTTCAATTCTCACCCTTACCAACCATGCCTCTTTCTCTATTGGCCGTGCTTTCTACCCTTCCAAGATCCCAACAAAATCTTCCTTTTCTTCCAACCCTTTACCGTTCTCAACCTCCTTTATCTTCTCCATTGCACCATTCAAGCACCTTCTCCCTGGCCATGGTTTTGTGTTCTTGTTCTCACCTTTTGAAGGAGCAAACGGGGTTAGCTCAGCTCAGCACCTTGGCCTCTTCAACTTGACCAACAATGGTAACCCCAAAAACCATGTTTTTGGGATTGAGTTTGATGTGTTCAAGAACCAAGAATTCAATGACATCAATGATAACCATGTGGGTTTGGATGTGAATTCTCTTACTTCTTTGGCCTCACACGATGCTGGATTTTGGGTCAGTGGAAAACATGATGAAAAGTTTAAGGAATTGAAGCTTAACAATGGGCAACTTGTTGAGAGTCACAAGATTTTGGCATGGAGCTTTAGCAACTCAAATTTTTCGATCGGCGATGCTTTGGTGACTACGAATTTGCCTTCATTTGTGCTTCCAAAAGACCCAGTTTTGAAGTCAAGAGGTTTTGTTTCAGGTATCAGTTTTGGGATTTTTATCTTTGTTATTGGTAGTGCAGCTATGGTGTTTGTTGTTTTGCTCAAAAGAAAAAGAAGCAAAAGAATGGAGGAAGAGGGAGATATTGAAGACTGGGAATTAGAGTATTGGCCACACCGTATTAGTTATGAAGACATTTATGCTGCAACTAAAGCATTTTCAGAACAGAATATAATTGGGTTTGGAGGGAATGGAAAAGTTTATAAAGGGATTCTACAAGGAGTAGAAGTAGCAGTGAAAAGAATCCCTTATGACAGTGAATATGGTATGAGGGAGTTTTTATCTGAGATTTCAAGCTTAGGAAGATTGAAGCATAGGAATGTGGTTCCATTGAGGGGTTGGTGTAAGAAAGAGAGAGGAAGCTTGATCCTAATTTATGATTATATGGATAATGGAAGTTTGGACAAGATAATATTTGATTCTGATGAGAACTCAATTTTCCATTGGAAAAACAGAATGAAGGTGCTGAAGGATGTGGCTATGGGGATATTGTATTTGCATGAGAGTTGGGAAGTTAAGGTGTTGCATAGGGACATAAAAGCAAGCAATGTGTTACTTGACAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTCGCCCGGATGCATCATCATGAGCAGATACCTAACACCTCTCGAGTGATCGGAACGGTTGGCTACATGGCACCGGAACTGCTAAGAACCGGGAGAGCCTCGACGCAAACTGATGTGTTCAGCTTCGGCGTGTTGGTTCTAGAGGTTGTGTGTGGGAGAAGGCCTATAGAAGAGAATAAGCCAGCATTGGTTGGTTGGGTGTGGAGGCTAATGGAGAGAGGAGAGTTGTGTTGTGCTCTTGATGAAAGATTGAAAATGAGGGGTGATGAAGATTATAGCATTGATGAAGTTGAGAGAGTTCTTCATCTTGGTTTGTTGTGCACACATTATGATCCTCAAGTTAGGCCAAGTATGAGGCAAGTTGTGAAGGTTTTGGAGGGTGAGAGTTTGGAAATAAGCTTAGTTGATAAAATAAATTCCGCTGCTGATGGATATAGTGGGGTTCACCCCACCATTGAAGATATATCTCAATGTTCTTTCACAACTCAATGTGAGGGCAGATGA 1866 0.4094 MISFATITTIMSSLLIYLFLLRITLVSSSTEFVYNTNFNSTNINLYANATIDDHSHSSILTLTNHASFSIGRAFYPSKIPTKSSFSSNPLPFSTSFIFSIAPFKHLLPGHGFVFLFSPFEGANGVSSAQHLGLFNLTNNGNPKNHVFGIEFDVFKNQEFNDINDNHVGLDVNSLTSLASHDAGFWVSGKHDEKFKELKLNNGQLVESHKILAWSFSNSNFSIGDALVTTNLPSFVLPKDPVLKSRGFVSGISFGIFIFVIGSAAMVFVVLLKRKRSKRMEEEGDIEDWELEYWPHRISYEDIYAATKAFSEQNIIGFGGNGKVYKGILQGVEVAVKRIPYDSEYGMREFLSEISSLGRLKHRNVVPLRGWCKKERGSLILIYDYMDNGSLDKIIFDSDENSIFHWKNRMKVLKDVAMGILYLHESWEVKVLHRDIKASNVLLDKDMNARLGDFGLARMHHHEQIPNTSRVIGTVGYMAPELLRTGRASTQTDVFSFGVLVLEVVCGRRPIEENKPALVGWVWRLMERGELCCALDERLKMRGDEDYSIDEVERVLHLGLLCTHYDPQVRPSMRQVVKVLEGESLEISLVDKINSAADGYSGVHPTIEDISQCSFTTQCEGR* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1564 621 SUPERFAMILY Protein kinase-like (PK-like) 287 580 IPR011009 -
Ahy13g1564 621 CDD lectin_legume_LecRK_Arcelin_ConA 30 218 IPR001220 GO:0030246
Ahy13g1564 621 Gene3D Phosphorylase Kinase; domain 1 269 384 - -
Ahy13g1564 621 Coils Coil 271 291 - -
Ahy13g1564 621 ProSiteProfiles Protein kinase domain profile. 309 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1564 621 Gene3D - 27 204 - -
Ahy13g1564 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Ahy13g1564 621 Pfam Legume lectin domain 30 203 IPR001220 GO:0030246
Ahy13g1564 621 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 202 584 - -
Ahy13g1564 621 PANTHER - 202 584 - -
Ahy13g1564 621 CDD STKc_IRAK 315 581 - -
Ahy13g1564 621 Pfam Protein kinase domain 310 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1564 621 SMART serkin_6 309 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1564 621 ProSitePatterns Protein kinases ATP-binding region signature. 315 336 IPR017441 GO:0005524
Ahy13g1564 621 Gene3D Transferase(Phosphotransferase) domain 1 385 594 - -
Ahy13g1564 621 PANTHER - 15 203 - -
Ahy13g1564 621 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 15 203 - -
Ahy13g1564 621 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 218 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1564 Ahy-Chr13 22558784 22561260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1564 28 533 Receptor kinase-like Gene Family AT4G04960 56.206 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy13g1564 Pkinase 7.30E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1564 - - adu:107478122 1216.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0893 18 10736022 10738576 Ahy13g1564 13 22558784 22561260 PCT
Ahy8g1652 8 33797010 33799525 Ahy13g1564 13 22558784 22561260 PCT
Ahy13g1564 13 22558784 22561260 Ahy18g0892 18 10733131 10735938 PCT
Ahy13g1564 13 22558784 22561260 Ahy8g1651 8 33793889 33796940 PCT