Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1551 ATGAATATTCTCATATTTGTGCAAACTCCAGTCGAAGACAGAATATTCACACATATTGTTTATGCTCCTGATACTGATACTGATACCATACTTAAACCACATCTTAATCCCAATTCTAAGTTCCTACCACTTGAGTTAGAAGATGATGAATTGAATTCCTCGAAGATGGTTGAGGGTATTCAAGTTAAAGATAAGTCACTTGATAATTATGATGTGAAAGTTTCATCAATTGATAAGAAAGACAATGGTTCAGTTCAGCCATATCATGATCAAACTGGGAAGAAGAAGATAGAGAAACCTGAATTGACTATTATTGACCATCCTGCTATTGGAAGGATTCCAAAGGCTGAAAAGGCAGAGCAAGTTTCAGCAGGATGGCCGGATTGGCTTTCTTCTGTTGCTGGTGAAGCTATCAAGGGATGGATACCAAGGAGCGCAAATACTTTTGAAAGGTTACATAAAATTGGGCAAGGAACTTATAGTACTGTTTATAAGGCACGTGATGTGACTAATCAAAAGATTGTTGCGTTAAAAAAGGTACATTTTGACAGTCTTAACCCTGAGAGCATCAAGTTTATGGCAAGAGAAATCCTTATTCTTCGTAGGCTCAACCATCCAAACATAATAAAGTTGGATAGCTTGATAACATCAGAGACATCCCACAACTTGTACCTTGTTTTTGAGTATATGGAACATGATCTTAAAGGACTTGCATCAAATCCTGCCATTAAATTCTCTGAACCACAGCTAAAATGCTACATGCAACAACTTCTTAGTGGATTGGATCATTGTCATAGTCATGGTGTCATCCATCGTGATATAAAGGGATCAAATATTCTCATTGACAACAATAATGTCTTAAAGATTGCAGATTTTGGTTTGGCAAGTTTTTTTGACCCCCATCATAGTATTCCATTGACAAGACGTGTTGTAACTCTTTGGTATAGACCACCAGAACTTTTACTCGGAGCAAACCATTATGGGGTTGCTGTAGATTTATGGAGCACTGGTTGCATATTAGGAGAACTATATAGTGGCAGACCTATATTGCCAGGAAAAACCGAGGTTGAGCAGATACATCGGATTTTTAAACTTTGTGGTTCCCCATCTGATGATTATTGGATGAAATTGCGGTTGCCACTTTCAACAGTATTTAAGTCTCCACACCATTATAGGAGATGTATTGCAGACACATTCAAGGATTATCCACATGCTGCTGTGAAGCTTATAGAGACTTTATTATCTATTGATCCAACACACCGAGGGACAGCTGCCGCTGCTCTCAAAAGTGAGTTCTTTACATTAGAACCTCTGCCTTGTGATCCATCAAGCTTACCAAAATATCCTCCCAGCAAAGAAATCGACGCCAAATTGCGAGATGAAGCAAACAGAAGGCAGTGTTATGCTGGAGATAGGGAGAAAAAAATTGACTCAAGAATTAGACAAGTATCAAAGGCATATGTCACGTCAAAAGACAATATTGGTTCAAAAACATCAATACAGTTGACTTTTTAG 1515 0.3802 MNILIFVQTPVEDRIFTHIVYAPDTDTDTILKPHLNPNSKFLPLELEDDELNSSKMVEGIQVKDKSLDNYDVKVSSIDKKDNGSVQPYHDQTGKKKIEKPELTIIDHPAIGRIPKAEKAEQVSAGWPDWLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSTVYKARDVTNQKIVALKKVHFDSLNPESIKFMAREILILRRLNHPNIIKLDSLITSETSHNLYLVFEYMEHDLKGLASNPAIKFSEPQLKCYMQQLLSGLDHCHSHGVIHRDIKGSNILIDNNNVLKIADFGLASFFDPHHSIPLTRRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYSGRPILPGKTEVEQIHRIFKLCGSPSDDYWMKLRLPLSTVFKSPHHYRRCIADTFKDYPHAAVKLIETLLSIDPTHRGTAAAALKSEFFTLEPLPCDPSSLPKYPPSKEIDAKLRDEANRRQCYAGDREKKIDSRIRQVSKAYVTSKDNIGSKTSIQLTF* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1551 504 ProSitePatterns Protein kinases ATP-binding region signature. 155 178 IPR017441 GO:0005524
Ahy13g1551 504 SUPERFAMILY Protein kinase-like (PK-like) 142 439 IPR011009 -
Ahy13g1551 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Ahy13g1551 504 CDD STKc_CDK9_like 149 433 - -
Ahy13g1551 504 PANTHER CYCLIN-DEPENDENT KINASE 62 501 - -
Ahy13g1551 504 SMART serkin_6 149 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1551 504 Pfam Protein kinase domain 149 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1551 504 ProSiteProfiles Protein kinase domain profile. 149 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1551 504 PANTHER CELL DIVISION PROTEIN KINASE 62 501 - -
Ahy13g1551 504 Gene3D Phosphorylase Kinase; domain 1 136 231 - -
Ahy13g1551 504 Gene3D Transferase(Phosphotransferase) domain 1 232 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1551 Ahy-Chr13 22292297 22297244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1551 141 474 Core Cell Cycle Gene Families AT5G10270 46.571 4.93e-108 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy13g1551 Pkinase 4.40E-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1551 - - adu:107466411 941.028