Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1521 ATGGGGTGTTGTGTCTCAACTAGTAGTAAGAGTACTTGTAGCAGCCGGAGCAATGGAGAGATGGCGAATCCATCATGCTTAGAAATCGGATGCTGTGTGCATAAGAAAGCAAGGAGAACCTTCTCTGATCATGTTATTTCACTACACCATTTGGCGTCGTTGCCGAGCAGGATTTTCACTAATGGAAAGAGTAGAGCTTCTTGCATATTTACGCAGCAGGGCCGCAAAGGGATCAATCAGGATGCAATGATTGTGTGGGAAGATTTTATGTCTGAAGATATGACCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCATCTCGTTGCGCGCAAAGTGAGGGACGCCTTGCCTTTGAAACTGCTCTCATTTCTGCATTCTTCTGAATCGAAGCGAAACGGATCAGGTAAAGCTTGCTTCAAGGGGAATGTAAAACCGGACAATGGAGACTCTCAGAAGGATTTATCAGCCGAGGATAAACTGAATTCAACGTGGAGAGAGGCTTTCATGAAGGCATATAAGTCTATGGACAAAGAGCTCAGGTCTCATCCGAATTTGGACTGCTTTTGTAGTGGGAGCACGGCTGTCACTATAGTGAAGCAGGGCTCAAATTTGTTCATGGGATATATCGGGGATTCTCGAGCAGTGATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACCATTGATTTGAAGCCCGATTTGCCAAGAGAAGCAGAAAGAATTAAACGGTGCAAGGGAAGGGTGTTTGCTTTGCAAGATGAGCCTGAGGTGCCAAGGGTATGGTTGCCTTTTGATGATGCACCGGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCCATACCTGAATTTTCTCACCGGCTGCTTACTGACAAAGATCAGTTTGTTGTTCTTGCCTCAGATGGTGTCTGGGATGTTTTAAGCAATGAAGAGGTGGTTGAGATAGTATCTTCGGCACCAACACGGTCATCAGCCGCAAGGATTCTGGTAGATGCTGCAGCCCGGGAGTGGAAACTTAAGTATCCGACTTCAAAGATGGACGACTGCGCCGTGGTCTGCCTATTTTTGGACGGTAAAATGGACACAGAATCCGACTATGACGAACAAGGCTTCTCTTCTGCAACCCTCCAGAGCAATCATTCTGGAAACCCGGTCGAGTCAGACGACGGACTAAAATCCGAGCCATCTTTGCAGAGGAACTTCACAGTTAGATCCTCAGAGGAAAATGAGCCTAATAACGGAGTACAATCCATTGATGTTGAAGATGGAGCATCATCAGCTGATGATCAAAATTGGTCAGGTTTGGAGGGTGTTACTCGTGTGAACTCATTGGTCCAACTACCTAGATTCTCAGAGGAAAGGCCAAAATCATGA 1416 0.4619 MGCCVSTSSKSTCSSRSNGEMANPSCLEIGCCVHKKARRTFSDHVISLHHLASLPSRIFTNGKSRASCIFTQQGRKGINQDAMIVWEDFMSEDMTFCGVFDGHGPHGHLVARKVRDALPLKLLSFLHSSESKRNGSGKACFKGNVKPDNGDSQKDLSAEDKLNSTWREAFMKAYKSMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFVVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDTESDYDEQGFSSATLQSNHSGNPVESDDGLKSEPSLQRNFTVRSSEENEPNNGVQSIDVEDGASSADDQNWSGLEGVTRVNSLVQLPRFSEERPKS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1521 471 MobiDBLite consensus disorder prediction 1 20 - -
Ahy13g1521 471 MobiDBLite consensus disorder prediction 408 452 - -
Ahy13g1521 471 CDD PP2Cc 72 370 IPR001932 -
Ahy13g1521 471 MobiDBLite consensus disorder prediction 380 452 - -
Ahy13g1521 471 Pfam Protein phosphatase 2C 136 347 IPR001932 -
Ahy13g1521 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Ahy13g1521 471 SMART PP2C_4 55 368 IPR001932 -
Ahy13g1521 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Ahy13g1521 471 MobiDBLite consensus disorder prediction 130 156 - -
Ahy13g1521 471 MobiDBLite consensus disorder prediction 381 400 - -
Ahy13g1521 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Ahy13g1521 471 Gene3D - 59 378 IPR036457 -
Ahy13g1521 471 SUPERFAMILY PP2C-like 58 372 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1521 Ahy-Chr13 21416706 21421338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1521 1 471 PP2C-type Phosphatase Gene Family AT1G03590 67.983 0.0 639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1521 13 21416706 21421338 Ahy13g1521 13 21416706 21421338 ECH
Ahy18g0853 18 10168154 10172195 Ahy13g1521 13 21416706 21421338 PCT
Ahy8g1615 8 33303951 33308011 Ahy13g1521 13 21416706 21421338 PCT
Ahy13g1521 13 21416706 21421338 Ahy18g0853 18 10168154 10172195 PCT
Ahy13g1521 13 21416706 21421338 Ahy8g1615 8 33303951 33308011 PCT