Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1516 ATGGGTTGGAAGAGATCTGATTTTGTGGTCAAGAGAGTGATGAAGATCTATGGAGAAGTTTTATTGGGATTCTTGTTGATCTGCACACTTCAGTTTTCAAGTGCAGACACTGATCCCACTGACGTTGCTGCAATTAATAGCTTACATGTTGCATTGGGATCTCCTCCTATCCCCCTGTGGTCATCTAGTGGGGGAGATCCATGTGGACAAGGGTGGCAAGGAGTTCAATGTAATGGTACATTCATACAAAAGATAGTTCTGAATGCCGCAAACTTGCAAGGAGAACTAGGCGATAATCTGGCGAATTTCGTTTCCATCTCAGTAATTGATCTAAGCAACAACAATATTGGGGGAAGTATTCCATCCAATTTGCCAGTTACACTGAGAAACTTTTTTCTTTCGGCCAACCAGTTCACCGGAAGTATTCCGGCCTCTTTATCCTCATTGACTGGACTGACAGACATGTCTCTTAACGAGAATCATTTAAGTGGAGAAATACCAGATGCATTCCAGTCACTTCCGCTGTTGATCAACTTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCGTCAATGGGAAATTTGTCATCAGTGACCACACTAAACTTGCAGAATAATCAACTCTCCGGGACTCTTGATGTTTTACAAGACCTTCCTCTTAAAAATTTGGATGTTTCGAACAATCAGTTTGCTGGTCCAATACCTCCGAAGTTGCTGAGCATCCCTAACTTCAGACAAGCTGGAAACCCATTCAATGTTGTTAACTCTACTGCACCAGCTACTTCTCCACCTCGTTCCCCAGTGGCTGCACCACCAGGAACACCGGTTCCTAAAACACCAGCTTCCGGAACACCATCTTCTGGAACGCCATCTTCCGGACGTGGACCTCCTAAACAAGCTGATGGACCAACTGCAGCTAAGGAATCAAGTTCTGGGAAATCGAAAAAACACACCAAAAGGGTGGTTTGGATAGTTATTGGTAGCATTTTGGGATTCATTATATTGTTACTAGCACTCATTCTCTTTTTGCCAAGATGTGCCAGAAGGGAGCGGGACGACAGAAGGTCCAAGAGACATCAAATTGGTGCATATGGAGGTGGAGGTGACAGACCACATTCTAGGGATCATGGGGCTTTGGTCCCACCGCCTAGTCAAACAGAGAAAGGGGATATTCGAAGACCGAAAGAGGATCACCATGTGGAAACCAGGGCACTGGCGGCCATTCCAAAGACTCAAGATGAGCAAGATAAAAATATGCAAAGAATGACTTCAATAGACATGAGTACAATCGATGTCTATTCCATGCCTCCTCCTCCTCCGCCGCCACCTCCCCCTCCACCACCTCCTCCTCCCCCTCCACCGCCACCACCTCCTCCTCCTCCAACTACTGACAGGGTGGTTGTTGAGCCGACCACATTCAACAGAGGGACTAATGTCAATAAATCCCCAATACGTTCTCCAATTCGTTCCCCAATACGTTCAGTTCCTCCTCCCACTTTTGCAAAATTTTTTAGTATTGCATCCCTTCAACAATATACAAATAGTTTCTCTCAAGAAAATCTTATAGGAGGTGGCATGCTGGGCACTGTGTATAGGGCAGAGCTTCCTAATGGGAAGGTACTTGCTGTGAAGAAGCTTGAAAAGAGAGTTTGTGATCACCAGAAGGAGGAGGATTTTCTTGAATTAGTGAATGGCATTGATAGAATACGACATGTAAATATCGTCGAGCTTATTGGGTACTGTTCGGAGCATGGTCAAAGGCTTCTGATATATGAGTATTGCAGTAATGGATCACTCTATGAGGCACTTCACTCAGAGGATGAATTCAAAACAAGACTCTCATGGAATGCTCGCATCCGGATAGCACTTGGGGCGGCTAGGGCCCTAGAGTATTTGCATGAGCAATGTATGCCAGCTGTGATTCACAGAAATTTCAAGTCTGCTAACATTCTTCTTGACGATGACCTATCAGTGCGTGTATCTGATTGTGGGTTGGCTCCATTAATAGCTTCAGGATCTGTCAGTCAGCTATCCGGACAACTGCTAACAGCTTATGGCTATGGAGCTCCGGAATTTGACTCAGGAGTTTACACATACCAAAGTGATGTTTACAGCTTTGGAGTAGTTATGTTAGAACTTTTGACTGGCCGTCAGTCCCATGACAGGAAGCGACCTCGAGGGGAGCAGTTTCTGGTCAGATGGGCAGTTCCCCAACTCCATGATATTGATGCATTGTCAAGCATGGTTGATCCTTCTTTGAGTGGAGAGTACCCCACCAAATCATTATCAAATTTCGCAGACATTATTTCTCGATGCCTTCAGTCGGAGCCAGAATTTAGGCCTGCAATGTCAGAGGTCGTCTTGTACTTATTGAACATGATCAGGAAGGAGTCCCAGCAAAGTGAATCAGATGAAATATGA 2427 0.4491 MGWKRSDFVVKRVMKIYGEVLLGFLLICTLQFSSADTDPTDVAAINSLHVALGSPPIPLWSSSGGDPCGQGWQGVQCNGTFIQKIVLNAANLQGELGDNLANFVSISVIDLSNNNIGGSIPSNLPVTLRNFFLSANQFTGSIPASLSSLTGLTDMSLNENHLSGEIPDAFQSLPLLINLDLSNNNLSGELPPSMGNLSSVTTLNLQNNQLSGTLDVLQDLPLKNLDVSNNQFAGPIPPKLLSIPNFRQAGNPFNVVNSTAPATSPPRSPVAAPPGTPVPKTPASGTPSSGTPSSGRGPPKQADGPTAAKESSSGKSKKHTKRVVWIVIGSILGFIILLLALILFLPRCARRERDDRRSKRHQIGAYGGGGDRPHSRDHGALVPPPSQTEKGDIRRPKEDHHVETRALAAIPKTQDEQDKNMQRMTSIDMSTIDVYSMPPPPPPPPPPPPPPPPPPPPPPPPPPTTDRVVVEPTTFNRGTNVNKSPIRSPIRSPIRSVPPPTFAKFFSIASLQQYTNSFSQENLIGGGMLGTVYRAELPNGKVLAVKKLEKRVCDHQKEEDFLELVNGIDRIRHVNIVELIGYCSEHGQRLLIYEYCSNGSLYEALHSEDEFKTRLSWNARIRIALGAARALEYLHEQCMPAVIHRNFKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGQLLTAYGYGAPEFDSGVYTYQSDVYSFGVVMLELLTGRQSHDRKRPRGEQFLVRWAVPQLHDIDALSSMVDPSLSGEYPTKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRKESQQSESDEI* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1516 808 PANTHER OS01G0253100 PROTEIN 26 806 IPR045271 GO:0004714|GO:0006468
Ahy13g1516 808 MobiDBLite consensus disorder prediction 282 296 - -
Ahy13g1516 808 MobiDBLite consensus disorder prediction 390 406 - -
Ahy13g1516 808 MobiDBLite consensus disorder prediction 351 420 - -
Ahy13g1516 808 MobiDBLite consensus disorder prediction 435 467 - -
Ahy13g1516 808 MobiDBLite consensus disorder prediction 254 319 - -
Ahy13g1516 808 MobiDBLite consensus disorder prediction 432 495 - -
Ahy13g1516 808 Gene3D Transferase(Phosphotransferase) domain 1 596 808 - -
Ahy13g1516 808 MobiDBLite consensus disorder prediction 266 281 - -
Ahy13g1516 808 SUPERFAMILY L domain-like 37 245 - -
Ahy13g1516 808 Pfam Protein tyrosine and serine/threonine kinase 521 790 IPR001245 GO:0004672|GO:0006468
Ahy13g1516 808 ProSiteProfiles Protein kinase domain profile. 518 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1516 808 SUPERFAMILY Protein kinase-like (PK-like) 492 792 IPR011009 -
Ahy13g1516 808 Gene3D Ribonuclease Inhibitor 38 263 IPR032675 -
Ahy13g1516 808 MobiDBLite consensus disorder prediction 469 489 - -
Ahy13g1516 808 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 26 806 - -
Ahy13g1516 808 Gene3D Phosphorylase Kinase; domain 1 493 595 - -
Ahy13g1516 808 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1516 Ahy-Chr13 21178832 21186377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1516 32 803 Strubbelig Receptor Gene Family AT4G03390 58.899 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Ahy13g1516 PK_Tyr_Ser-Thr 6.30E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1516 - - ahf:112737625 1395.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0846 18 10098998 10104616 Ahy13g1516 13 21178832 21186377 PCT
Ahy8g1609 8 33212940 33218561 Ahy13g1516 13 21178832 21186377 PCT
Ahy13g1516 13 21178832 21186377 Ahy18g0846 18 10098998 10104616 PCT
Ahy13g1516 13 21178832 21186377 Ahy8g1609 8 33212940 33218561 PCT