Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1498 TTTGTTTTGGGGGTTTGCAGTAGTGGAGGCCTAGTGGCATACGGTGAAGCGGTACAAAGTGAGAATGTGAAAGAAGCCCCAAGAAAGAAAGTGGTGATTCTTGGAACTGGTTGGGCAGGAACCAGTTTTCTTAAGAGCATCAGAAGTTCATCTTATGATATCCATGTTGTTTCACCTCGTAACTATTTTGCATTCACCCCTTTGTTGCCAAGTGTCACTTGTGGCACTGTCGAAGCACGCAGCATTGTTGAACCCATTCGCAACATCTCAAGAAAGAGTGGTGTAAATATTGAATTCAGTGAAGCTGAATGCTATAAGATCGACCCGAAGAACAAGAAAGTTTACTGCCGTGCTGATCCAGAGAAAAAGATGGGTGGGATTGAAGATTTTTCCCTTGATTATGATTACCTTGTAATAGCCATGGGAGCACGTTCTAATACCTTCAACACACCTGGAGTTCAGGAACATGCTTACTTCTTGAAGGAAGTGGATGATGCTCTAAGAATCCGGCAAAAGGTGGTTGATCTTTTTGAGAAAGCAAGCATTCCATCCATATCTGATGAAGAGAAGAAGAAGCTTCTGAGTTTTGTGATTGTTGGAGGAGGCCCAACTGGGGTAGAGTTTGCTGCAGAACTTCATGACTTTGTTCATGAGGATCTTTCTAAACTCTATCCTTCTCTACAACGTTATGTCAATATCACTTTGCTGGAGGCCGGAGATCATATCTTAAACATGTTTGACAAGAGAATCACAGAATTTGCTGAAACAAAGTTCAAAAGGGATGGCATAGATGTGAAGTTAGGATCTATGGTTATCAAAGTAAGTGAGAGAGAAATCTCGGCCAAAGACAGAGTAAGCGGTCAAGTTGCTTCCATACCTCATGGAATGGTAGTTTGGTCCACCGGCGTCGGTCCTCGCCCAGAAATAATTGAATTTATGAAACAAGTTGGCCAGAGTAATAGACGTGCATTAGCCACTGATGAATGGCTAAGGGTGGAGGGATATGACAACATCTATGCTTTAGGTGATTGTGCCACTATAAATCAGAGGAAAGTTATGGAAGATATAGCATTGATATTCAGCAAGGCAGACAAGAAGAACAGCGGGAAGTTGGATCTGAAAGAGTTTCAAGGCGTAGTGGACGACATAATCGAGAGGTACCCTCAGGTGGAGATTTATTTAAAGAAGAACCAAATGAAAGATATTGCCACCTTGCTCAAGTTTTCTCAAGACAGCTCAGTTACTGTTGACATTGAATCCTTCAAATCTGCACTTTCCAATGTTGATACTCAGATGAAAAATCTCCCTCCAACAGCTCAGGTAGCTGCTCAGCAAGGAGCGTATCTTGCAGATTGTTTCAACCGTATGGAGATATGCGAGCGGTATCCGGAAGGTCCTCTTAGATTCAGGGGAACCGGACGCCATCGCTTTCATCCCTTCAGGTACAAGCATTTTGGACAATTTGCTCCTCTAGGAGGAGAACAAACTGCAGCTCAACTTCCGGGAGATTGGATTTCAATTGGCCATAGCACTCAATGGTTGTGGTATTCTATATATGCTAGCAAACTAGTGAGTTGGAGAACAAGAGCATTGGTGGTATCTGATTGGGGAAGGAGATTCGTATTTGGGAGGGACTCAAGTCGAATCTGA 1650 0.4309 FVLGVCSSGGLVAYGEAVQSENVKEAPRKKVVILGTGWAGTSFLKSIRSSSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNISRKSGVNIEFSEAECYKIDPKNKKVYCRADPEKKMGGIEDFSLDYDYLVIAMGARSNTFNTPGVQEHAYFLKEVDDALRIRQKVVDLFEKASIPSISDEEKKKLLSFVIVGGGPTGVEFAAELHDFVHEDLSKLYPSLQRYVNITLLEAGDHILNMFDKRITEFAETKFKRDGIDVKLGSMVIKVSEREISAKDRVSGQVASIPHGMVVWSTGVGPRPEIIEFMKQVGQSNRRALATDEWLRVEGYDNIYALGDCATINQRKVMEDIALIFSKADKKNSGKLDLKEFQGVVDDIIERYPQVEIYLKKNQMKDIATLLKFSQDSSVTVDIESFKSALSNVDTQMKNLPPTAQVAAQQGAYLADCFNRMEICERYPEGPLRFRGTGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWISIGHSTQWLWYSIYASKLVSWRTRALVVSDWGRRFVFGRDSSRI* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1498 549 SUPERFAMILY EF-hand 309 436 IPR011992 -
Ahy13g1498 549 ProSiteProfiles EF-hand calcium-binding domain profile. 351 386 IPR002048 GO:0005509
Ahy13g1498 549 PANTHER NAD(P)H DEHYDROGENASE B2 48 549 - -
Ahy13g1498 549 Gene3D - 394 548 - -
Ahy13g1498 549 Gene3D - 18 385 - -
Ahy13g1498 549 PRINTS FAD-dependent pyridine nucleotide reductase signature 195 213 - -
Ahy13g1498 549 PRINTS FAD-dependent pyridine nucleotide reductase signature 134 152 - -
Ahy13g1498 549 PRINTS FAD-dependent pyridine nucleotide reductase signature 31 50 - -
Ahy13g1498 549 Pfam Pyridine nucleotide-disulphide oxidoreductase 29 352 IPR023753 GO:0016491
Ahy13g1498 549 PANTHER NADH DEHYDROGENASE 48 549 IPR045024 GO:0003954|GO:0006116
Ahy13g1498 549 SUPERFAMILY FAD/NAD(P)-binding domain 196 348 IPR036188 -
Ahy13g1498 549 SUPERFAMILY FAD/NAD(P)-binding domain 29 247 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1498 Ahy-Chr13 20766901 20772467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1498 1 549 Chloroplast and Mitochondria Gene Families AT4G21490 69.176 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1498 K03885 - gmx:100820044 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1498 13 20766901 20772467 Ahy13g1498 13 20766901 20772467 ECH