Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1488 ATGGAGTTTGACCTTGAAAATCCTCTAGACAACTCTCATGCTCTTCTTCAATGGGATGCTGTTGCTTCACTATTCCACATTGAATCTCAACACACTCCATCTCACACTTACTTTCACTCTCTCAAAGCTTCAAACTTTAACATCTCTGTTAGAAGGGAACTCATTTCTCTAATCTCCAAGTTTTCTTGCAGTTTGGATCCACTTGTTTCTTACCTTTCTATCAACTATCTGGACCGGTTCTTGTCCAACCATGGGATACTGAAACAAAAGGCATGGGCCCTTAGGCTGCTTGCAATTTCTTGCATTTCTTTAGCATCCAAGATGATAAAGCCAGGGTACTCTGCCATTGATACTCAGGCCCTTCTCATTAATGATGGTGGCATCATTTTTGAGACACAAACAATGCAAAGAATGGAAGGACTCATCTTGGGAGCATTAGAATGGAGAATGCGGTCCATTACCCCTTTCTCCTTCTTAACTTTCTTTATTACTTTAATATGTGTCAAAGACCCAATGGAACAGGTTCTCAAGAAAAGAGTGGCTGAAATTATATTCAAGTCACAAGGAGAGATAAAGCTTTTGGAATTCAAGCCATCTATAATTGCCGCATCAGCACTTCTTTGTGCTTCTCATGAACTCTTTCCTTTTCAATACCAAAGCTTCTCAGCAGCAATATCCAATTGTTTATATGTAAATAAAGAAAACATGGTGAAATGCTATAATGTGATACAAGAAGTGGTAGGAATGGAGATGGAAGAAGAGGAGTGTGTGATCAATGAAGTTTCAAGTTCAGGAACACCAGTGAATGTGTTAGACTTAGACCATAAGTTTTCACTGAGCTCAGAAAGTGAGAAAACCGATAATAATGGAGGAATCGCCATAGTAGTAGATGATGATGAAGAAGAAGCCTTGCAAGAGAAGAAGGATTTCATCATCAACAAGAGAAGGAAGATGAATAATAATAACAACAATCAAACGGTCCATGTTTCTCGGATGGCACAATGCTGA 1008 0.3899 MEFDLENPLDNSHALLQWDAVASLFHIESQHTPSHTYFHSLKASNFNISVRRELISLISKFSCSLDPLVSYLSINYLDRFLSNHGILKQKAWALRLLAISCISLASKMIKPGYSAIDTQALLINDGGIIFETQTMQRMEGLILGALEWRMRSITPFSFLTFFITLICVKDPMEQVLKKRVAEIIFKSQGEIKLLEFKPSIIAASALLCASHELFPFQYQSFSAAISNCLYVNKENMVKCYNVIQEVVGMEMEEEECVINEVSSSGTPVNVLDLDHKFSLSSESEKTDNNGGIAIVVDDDEEEALQEKKDFIINKRRKMNNNNNNQTVHVSRMAQC* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1488 335 PANTHER CYCLINS 5 283 IPR039361 -
Ahy13g1488 335 Gene3D - 34 151 - -
Ahy13g1488 335 SMART cyclin_7 52 144 IPR013763 -
Ahy13g1488 335 Coils Coil 301 321 - -
Ahy13g1488 335 Pfam Cyclin, N-terminal domain 21 150 IPR006671 -
Ahy13g1488 335 SUPERFAMILY Cyclin-like 135 246 IPR036915 -
Ahy13g1488 335 SMART Cyclin_C_2 153 270 IPR004367 -
Ahy13g1488 335 Pfam Cyclin, C-terminal domain 153 252 IPR004367 -
Ahy13g1488 335 SUPERFAMILY Cyclin-like 16 150 IPR036915 -
Ahy13g1488 335 PANTHER CYCLIN-D6-1-RELATED 5 283 - -
Ahy13g1488 335 CDD CYCLIN 51 108 IPR013763 -
Ahy13g1488 335 Gene3D - 23 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1488 Ahy-Chr13 20502790 20504979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1488 1 286 Core Cell Cycle Gene Families AT4G03270 45.973 6.09e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1488 K18812 - gmx:100799951 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1488 13 20502790 20504979 Ahy13g1488 13 20502790 20504979 ECH
Ahy18g0806 18 9371214 9373596 Ahy13g1488 13 20502790 20504979 PCT
Ahy8g1576 8 32742494 32744889 Ahy13g1488 13 20502790 20504979 PCT
Ahy13g1488 13 20502790 20504979 Ahy18g0806 18 9371214 9373596 PCT
Ahy13g1488 13 20502790 20504979 Ahy8g1576 8 32742494 32744889 PCT