Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1482 ATGGTGAGAGCTCCTTTCTATGACAAATATGGAGTGAAGAAAGGTGCATGGAGTAGAGAAGAGGATCAAAGATTAATAGCTTTTGTTCAAAGATATGGTCATTCTAATTGGCGTCAGCTCCCAAAGTTTGCAGGTTTAGCAAGGTGTGGGAAAAGTTGCAGACTTCGCTGGTTGAATTACTTGAGGCCAAATCTAAAACATGGGAACTACACCCAAGAGGAAGAAGAATTAATAATCAAATTACACCAAGAATTAGGAAATAGATGGTCTTTGATTGCTGAAAGACTTCCTGGAAGAACAGACAATGAAATAAAGAACCATTGGCATAGCCACCTCAAGAAGTTATCATCAAAACACAACAACAATGAGATCAATCCATCGTCTGAATCTGAATCTGAATCAAAATCAAACAACCCAATTGATGATGATATTCTTGAAGGAAAACATACCAATCAGCCTAAAGAATCTGTAAGGCCAAGTTATGATTATGTTGATAGTGCTAATAATAATAAATTCCAGCACCGTGTTCTAGAAAGTTCATCATCAACAGAAACTTCGTCATATACTGATGATGAAGTAGGTCACAGCTATTATTCTCTTATTACTCCCAATAATGTTGAACAATCAACAATAATGAATAACTCTCCAACATCAAGCGAAGATTATTGTGTGGTTCCATCAGTATCATTTGAAGAATTTGGTGGAGATTTTTGGACTGAGCCATTCATAGTGGCAAATAATGATGCATATGGTAATGATGAGATAATAATAAGTGGTGAAGACGATGTTGGGTTTCTTGTTCCATACTTGTACGAGAGTGCAGATTTTTGTTTTAACTTGTAG 843 0.3606 MVRAPFYDKYGVKKGAWSREEDQRLIAFVQRYGHSNWRQLPKFAGLARCGKSCRLRWLNYLRPNLKHGNYTQEEEELIIKLHQELGNRWSLIAERLPGRTDNEIKNHWHSHLKKLSSKHNNNEINPSSESESESKSNNPIDDDILEGKHTNQPKESVRPSYDYVDSANNNKFQHRVLESSSSTETSSYTDDEVGHSYYSLITPNNVEQSTIMNNSPTSSEDYCVVPSVSFEEFGGDFWTEPFIVANNDAYGNDEIIISGEDDVGFLVPYLYESADFCFNL* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1482 280 MobiDBLite consensus disorder prediction 135 155 - -
Ahy13g1482 280 CDD SANT 69 112 IPR001005 -
Ahy13g1482 280 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy13g1482 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy13g1482 280 Gene3D - 13 66 - -
Ahy13g1482 280 MobiDBLite consensus disorder prediction 115 165 - -
Ahy13g1482 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy13g1482 280 CDD SANT 16 61 IPR001005 -
Ahy13g1482 280 Gene3D - 69 142 - -
Ahy13g1482 280 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy13g1482 280 PANTHER MYB-RELATED PROTEIN 308-LIKE 1 250 - -
Ahy13g1482 280 SMART sant 13 63 IPR001005 -
Ahy13g1482 280 SMART sant 66 114 IPR001005 -
Ahy13g1482 280 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy13g1482 280 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy13g1482 280 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Ahy13g1482 280 MobiDBLite consensus disorder prediction 119 134 - -
Ahy13g1482 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1482 Ahy-Chr13 20341304 20343217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1482 1 146 MYB Transcription Factor Family AT2G31180 58.940 5.93e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy13g1482 Myb_DNA-binding 3.30E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1482 K09422 - gmx:100781032 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1482 13 20341304 20343217 Ahy13g1482 13 20341304 20343217 ECH
Ahy18g0805 18 9332879 9334754 Ahy13g1482 13 20341304 20343217 PCT
Ahy8g1573 8 32695413 32697963 Ahy13g1482 13 20341304 20343217 PCT