Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1471 ATGATGAAGAAGTGCGAACTGTGCAAGGTTAGGGCTAGGACTTTCTGCGAGTCGGACCAGGCTAGCTTATGCTGGACCTGCGACGCTAATGTTCACGGTGCTAACTTCCTTGTGGCTAAGCACTCCAGGACGCTCCTCTGCCGCGACTGTTACTCACTTACGCCGTGGAAAGCCACCGGCGCCGCACTCCTTAACGCCGTTTCCCTCTGCCACAGTTGTTCCAAGGGAGAACAAGAAAAACCAAAAGAAGAAGAGAGCGAAGGGGAAAATAACGACGAGACAGAAATCGAAGACGACGACGACGACGACGGTTTCGAAGATGTGGACGGAGAAAATCAGGTTGTGCCTTGGTGCTCTTCCACCACCCCGCCGCCTCCGCCGTCGAGTTCCGCCGGCAGCGAAGAGTCCGGGTTCGGCGCTGGAGATGGTTTTGACCTGGCGACGTCGTTGAAACGACGGCGTGACGTCGACGCTTCGGATCGTGACCTTCAGGAAGCCTCGAACGCTTCGATTTGTGAGCGGCGGAGGGTGGCAGAGGACCACCACTGA 549 0.5701 MMKKCELCKVRARTFCESDQASLCWTCDANVHGANFLVAKHSRTLLCRDCYSLTPWKATGAALLNAVSLCHSCSKGEQEKPKEEESEGENNDETEIEDDDDDDGFEDVDGENQVVPWCSSTTPPPPPSSSAGSEESGFGAGDGFDLATSLKRRRDVDASDRDLQEASNASICERRRVAEDHH* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1471 182 PANTHER - 2 179 - -
Ahy13g1471 182 MobiDBLite consensus disorder prediction 88 109 - -
Ahy13g1471 182 MobiDBLite consensus disorder prediction 147 182 - -
Ahy13g1471 182 CDD Bbox1_BBX-like 4 46 - -
Ahy13g1471 182 MobiDBLite consensus disorder prediction 77 182 - -
Ahy13g1471 182 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Ahy13g1471 182 Pfam B-box zinc finger 3 43 IPR000315 GO:0008270
Ahy13g1471 182 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 179 - -
Ahy13g1471 182 SMART bboxneu5 1 46 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1471 Ahy-Chr13 19901880 19903282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1471 1 125 C2C2-CO-like Transcription Factor Family AT4G27310 41.463 4.46e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy13g1471 zf-B_box 2.00E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1471 - - gmx:100809520 149.828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1471 13 19901880 19903282 Ahy13g1471 13 19901880 19903282 ECH
Ahy18g0793 18 8970164 8971642 Ahy13g1471 13 19901880 19903282 PCT
Ahy8g1567 8 32550994 32552491 Ahy13g1471 13 19901880 19903282 PCT
Ahy13g1471 13 19901880 19903282 Ahy18g0793 18 8970164 8971642 PCT
Ahy13g1471 13 19901880 19903282 Ahy8g1567 8 32550994 32552491 PCT