Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1458 ATGGATGTTGACTCGGAACCACTCAGTTCACAAGAGAACGTCGAAGATTGCATGATGAATGGTGTGGAAGAAAATGTTAACTGCACTTGTGATTGCGGTGGCAGCAGTAGTAAGTGTGTGTCTGTGACGGCCGATGATATTATAAACCAGACCTTTGAAACATCGGATGCAGCTTATAACTTGTATGTACGTTATGCGAGGTGTCTCGGGTTTGGAGTTCGCAAGGGTGATACAGCACGTGGAAAAGATGGAACACAGCGCAGAAGGAGGTTTTTTTGCAGCAAGGAAGGAAAGAGAGCCGAGAAATACATATCTAGTTTGAGTAGGAAGAGGGAGCATAGAGCGCTGACTCGCACTGGTTGTGAAGCCATGCTTGCGGTGTATCTTGACACTAAAACTTCGACTTGGAGGGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTGTCCCAAAATGCTTGGTACACCTAATTCCAAACCATCGAGGGTTGACTGAGCCACAAAAAGCTCAGGCGAATACCATGCATGATCATGGTCTTCCAACCTCTAAAATAATGGGACTAATGGTAGGCCAAGCCGGTGGTTATGCCAATGTCGGGTTCACAAAGAAGGACCTAGATAATCACTTTCAAAGAACTCGTCGTGCAAAGCTCATTGGTGGGGATTCCAATGCGACGATTAGCTATCTACTTGGGAAAGCAGATGTCGACCCGATGGCCATGGTAAGGTACAGTGCTACTGATGAAGGTCGGCTGGCAAGTTTATTTTGGGCAGATGGCATTTGTAGGTCCGATTATCAGTGCTTTGGAGATGTGCTTGCATTCGATACAACCTACCGGAAGAATAAGTACAGAAGGCCGTTGGTAATCTTCTCAGGTTATAACCATCACCGCCAAACATGTATATTTGGTTTTGCCTTGGTAGAGGACGAACGGACAGCAACATATACATGGTTGTTGCAAAACTTTCTAGAAGTCATGCTGAACAAGTCTCCCAGTGTTGTGGTCACAGATGGTGACGAAGCAATGAAGGCAGCAATTCGAGAAATCTTCCCGGATGCAACTCACCGATTATGTGGTTGGCACATTCAGAAGAATGTAACGGCAAAAATAAAAAACAAAAAATTTTCCAACGACTTCAAAAGATGTTTGTATACTCCATGGCATCCGGATGAATTTGAAGAATATTGGGAGAATATGATAAAAAAATATGGGTTGGAGGAAAATGAATGGGTTCTAAATGAATATGAGAAGAGGAAAAGTTGGGCAAGCGCTTACTTGAGGGATAAATTCTGTGCTGGACTTAGAACAACATCAAGGTGTGAGGCGATAAACAACTTCATCAAGAGGTTTATTTGCATTCACCAAAGTCTTCTAGAGTTGGTCCAAAATCTTGAACATGCTCTTAGGGACTATAGAAACAATGAATTAGTTTCTCAATTTAAGACGCTGTATGGAGAGCCCGTTCTAACTACTGGGCTAGAAGCATTGGAGCTTTCTGCTGCCAATTTTTACACAAGGGAGATTCTTGGAGAAGTAAAAAAGGAGATTCAAAGAGTGGTCGCATTAGATGTAATAAATGAGGAAAACATATCAACCACTGTTGTGTTAAAAGTTAAGGAGTGTGACAGGAGGCAACATATTTATAACGTACTTTATGATCGCAATACTGAGCATATGGAGTGTGAATGTAGTCGGTGGAGTAGTGAAGGCATTCCTTGCAGCCACATGTTTTGTGCAATGAAAAGGGTAGGTTTACAGAAGTTGCCAGATAGACTTCTTTTGAAAAGATGGTCGAAGGATGCTAAGAAGTATCTGGATGAAAGTTCTGCTGGAGGCACTACGCAAGACAGAGAAAGAGAATTTTTAATGCGCTATGGCGCATTGTCAGTGGCAGCTACGTGGATGGTATTCTTAGGAGCTCAAGATGGTCCTTCTTTCCATGACACTATGAATGAAGTCTGGTGTTGGACCCAAACACTAGAACAAAAATCTGACTTGAAAAGACAAACAAGAGATTCAAATTAA 2028 0.4236 MDVDSEPLSSQENVEDCMMNGVEENVNCTCDCGGSSSKCVSVTADDIINQTFETSDAAYNLYVRYARCLGFGVRKGDTARGKDGTQRRRRFFCSKEGKRAEKYISSLSRKREHRALTRTGCEAMLAVYLDTKTSTWRVKKLVEKHNHDLVPKCLVHLIPNHRGLTEPQKAQANTMHDHGLPTSKIMGLMVGQAGGYANVGFTKKDLDNHFQRTRRAKLIGGDSNATISYLLGKADVDPMAMVRYSATDEGRLASLFWADGICRSDYQCFGDVLAFDTTYRKNKYRRPLVIFSGYNHHRQTCIFGFALVEDERTATYTWLLQNFLEVMLNKSPSVVVTDGDEAMKAAIREIFPDATHRLCGWHIQKNVTAKIKNKKFSNDFKRCLYTPWHPDEFEEYWENMIKKYGLEENEWVLNEYEKRKSWASAYLRDKFCAGLRTTSRCEAINNFIKRFICIHQSLLELVQNLEHALRDYRNNELVSQFKTLYGEPVLTTGLEALELSAANFYTREILGEVKKEIQRVVALDVINEENISTTVVLKVKECDRRQHIYNVLYDRNTEHMECECSRWSSEGIPCSHMFCAMKRVGLQKLPDRLLLKRWSKDAKKYLDESSAGGTTQDREREFLMRYGALSVAATWMVFLGAQDGPSFHDTMNEVWCWTQTLEQKSDLKRQTRDSN* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1458 675 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Ahy13g1458 675 Coils Coil 455 475 - -
Ahy13g1458 675 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Ahy13g1458 675 Pfam MULE transposase domain 272 366 IPR018289 -
Ahy13g1458 675 PANTHER OS02G0262500 PROTEIN 46 639 - -
Ahy13g1458 675 SMART 26again6 560 587 IPR006564 GO:0008270
Ahy13g1458 675 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 639 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1458 Ahy-Chr13 19311036 19316463 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g1458 MULE 4.00E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1458 - - ahf:112717474 1313.52