Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1435 ATGAGATTTGAGAGGATCATGGAATTTGAAACACTATGTGAGTGCTGTGGGGTTGCAAGAGCCATTGTTTATTGCAAATCAGATTCTGCACGTTTGTGCATGGATTGTGATGTGTCCGTACACAGTGCAAATTGTTTATCTATGAGGCACCTTCGTTCTCTCTTATGTGACAGGTGCAATTCCGAAGCAGCAATTGTTCATTGCATTGAGGAAAAGTTGTCATTTTGCCAAGGTTGTTGTGAATTGAACCAAAATGGGTGTTCAATTTTGGGACACAGGCTTCAATCGTTGAATTGTTACAAAGGTTGTCCCAATTTCACTGATTTGCCTGGCTTATTCTCCTTTGTTCTCGATGATTATTCCTGTTCAAGTGGTTTGGACCATAATGGTGGCGGCAGCGGATCAATTGACACATCATTGCCTAGAAGTGAAAGCTGCAATAGCAAGTGTTTGGAGCAGCTTGTTAACACTATTAACAATGATGGCAATTTCGGTTTTGTTAATGAAAAGTTGAAGGAAACAGAACCATGTGTCAAATTTGAGCCTTGGATGGAGCAATCTTTGAGTTCCGGCATTCCTCCATCAAATGCAAATTACATGTCAATGGCATACTCTGGTGACCAAGCAATTTTCCTTCCAAACCTTCCGAAGCTGCAGGAATGTCCGAATTTGAACAATCTAGGAATCCATGATGGTGATGGTCTCAACATGGATAATTTTCAATTTAACTTTGAAAATACTGATGAAATATTTGACTATTCTCAAATTGACACAACATACCAACTTGTTAATGGAGGAATGGACCGTGAATTAATGGGAAATAACATATCAGCAACAGAATCTAATGCTCTTTTCGAGAGTACAATAGAGGCTGGTGGATCAGCTAGCGAGATGTATGGAATCAACAGCAATGAGAATTGTGTGCTTATGCCTCCTAGCTGCAATGAAAACAGCAATCTGGGATTCTCAAAGGGTAGTCAACTCTATTCAAGCATGTCACTTCCACTTCCTAACGGCGAGAGTGAAATCGGTGCTACAGATTATCAAGATTCTGGTTTGTCATCGATGTTCCCGATGGGTGATTTGTCTATGGAACCGATCTCAAAGGGTACATGCCAGCAAGCCCGGGAGAAAGCGAAATTGAGATTAAATGAGAAAAAGAAAAATCTAAGGTTTGGTAAGCAAATAAGATATGAATCTCGCAAAGCAAGGGCTGATTCGAGAAAACGTGTGAAAGGTAGATTTGTGAAAGCAGGCGAAGCATATGATTATGATCCTAAGAAGACAAGGAGCCTCTAA 1299 0.4042 MRFERIMEFETLCECCGVARAIVYCKSDSARLCMDCDVSVHSANCLSMRHLRSLLCDRCNSEAAIVHCIEEKLSFCQGCCELNQNGCSILGHRLQSLNCYKGCPNFTDLPGLFSFVLDDYSCSSGLDHNGGGSGSIDTSLPRSESCNSKCLEQLVNTINNDGNFGFVNEKLKETEPCVKFEPWMEQSLSSGIPPSNANYMSMAYSGDQAIFLPNLPKLQECPNLNNLGIHDGDGLNMDNFQFNFENTDEIFDYSQIDTTYQLVNGGMDRELMGNNISATESNALFESTIEAGGSASEMYGINSNENCVLMPPSCNENSNLGFSKGSQLYSSMSLPLPNGESEIGATDYQDSGLSSMFPMGDLSMEPISKGTCQQAREKAKLRLNEKKKNLRFGKQIRYESRKARADSRKRVKGRFVKAGEAYDYDPKKTRSL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1435 432 CDD Bbox1_BBX-like 12 55 - -
Ahy13g1435 432 ProSiteProfiles CCT domain profile. 376 418 IPR010402 GO:0005515
Ahy13g1435 432 ProSiteProfiles Zinc finger B-box type profile. 8 55 IPR000315 GO:0008270
Ahy13g1435 432 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 12 427 - -
Ahy13g1435 432 SMART bboxneu5 8 55 IPR000315 GO:0008270
Ahy13g1435 432 Pfam CCT motif 376 418 IPR010402 GO:0005515
Ahy13g1435 432 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 12 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1435 Ahy-Chr13 18378095 18382635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1435 9 426 C2C2-CO-like Transcription Factor Family AT3G21880 37.204 1.90e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy13g1435 CCT 1.90E-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1435 - - ahf:112737556 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1435 13 18378095 18382635 Ahy13g1435 13 18378095 18382635 ECH