Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1431 ATGGTTGAACGAAAGCAATTCAAGACAAGGTTATGTGTTCCTTATCAGAGAGGACGCTGCACGCGTCATAATTGCAACTTTGCGCATGGCAATGCTGAGTTGCGAAGGTTCTCTGCCACTTATAATGGTAGGAAAGACTTAGCCAATGACTTGAGGGATACACTAGACAGAAGGTATTTATCACCTCGAAGGCACTCGCCAACTCGAGATGGTAGAGGACACCAGGCCATTCATGAACACAGTCCGTCAAGATCCATGGAGAAAAAAAGTGACAGAAGACATTGGAGAAAACAGGGCATTACTGGCCAAAGTGATATTTCTGCAAGCTTGAAAGTCTCAGATAGAATTCAAGAACCGGTTAAAGAAGGAAAATTCGTTTCTTCTTGTTCTAGAAATACACTTGAGGAGCAGTTAAAGAAAGTACAGTTGGATATCAGGACTTTTGAGGACCGAAAATTCCAACTATCGGTTTACCTGGATGAGAGTGCTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTTGAAGCTCAGTTAGTTAAAGAGAATGAGGAGTGTAAAAGAATCAATTCTGGAATAAGGAAGTTTATCAGAGTGTACAATCATAATTCGCAGCTACAAGAAGAACTGAAGAGATCACAAGTCCGACTTCAAAGGCTTGGTGATCAACTTGTCTCGGATATTGCTAGAATTGGTGCTGAGGAAGAAGATCTAAGCATTGATATTGTAAGCAATGGTGAGAATAATAGTCATCCTCCAATCCCCAAACATAATGCCGAACAGAATGATGCATCTCCCCATGGAAAAAAGCTGCATGTGCATGCTGAGCAGGATGTATTGGAAGAGTTAAAACAAGATAGATCAAAAGTTGGGAATTCGGTTGAAACAAGAAGAAACAGGAAGCGATCTCGTTGGAATTTGCCTGCTCAATTGAATGACAAGGATAATGTAGGCCTTGAAACTCCAAACGATGGAACTGAAGATGCTAGGCCTTTAGATATTGAAAGCAAGCAGAAGAGAGGAAAGCTGAATTCTTCTGACAACCTTTCTTCAGAAAAGTTGAAGGAATTTAGGAATGAAGTGCCGTCAACAAGCATGGCAGCTCATGTGTTTGACGAGGAAGTTGAGATTGTATTTGATGACAGAATTGACCTCAACGAAATTGCACATACAGAAAATGACAATGAAGTGGCATTAGAGGTGAAGGGCGTACCCCTAATGCTTCCCCCAGCATTGATTCCCCATACCAATTATTCGCAGACATTTGTTGTTAAAGACTTAAAGACCATTTCAATCTCGTGCAGTACGAGGGGGACGACGAGAATGTGGACGTGGATGGTCTTGATGAAGGGGGAAATGTGGATATTGTCTGATTAA 1380 0.4145 MVERKQFKTRLCVPYQRGRCTRHNCNFAHGNAELRRFSATYNGRKDLANDLRDTLDRRYLSPRRHSPTRDGRGHQAIHEHSPSRSMEKKSDRRHWRKQGITGQSDISASLKVSDRIQEPVKEGKFVSSCSRNTLEEQLKKVQLDIRTFEDRKFQLSVYLDESAQEVDSLNSRIQELEAQLVKENEECKRINSGIRKFIRVYNHNSQLQEELKRSQVRLQRLGDQLVSDIARIGAEEEDLSIDIVSNGENNSHPPIPKHNAEQNDASPHGKKLHVHAEQDVLEELKQDRSKVGNSVETRRNRKRSRWNLPAQLNDKDNVGLETPNDGTEDARPLDIESKQKRGKLNSSDNLSSEKLKEFRNEVPSTSMAAHVFDEEVEIVFDDRIDLNEIAHTENDNEVALEVKGVPLMLPPALIPHTNYSQTFVVKDLKTISISCSTRGTTRMWTWMVLMKGEMWILSD* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1431 459 MobiDBLite consensus disorder prediction 58 100 - -
Ahy13g1431 459 MobiDBLite consensus disorder prediction 244 269 - -
Ahy13g1431 459 MobiDBLite consensus disorder prediction 283 357 - -
Ahy13g1431 459 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Ahy13g1431 459 Coils Coil 131 151 - -
Ahy13g1431 459 Coils Coil 204 224 - -
Ahy13g1431 459 MobiDBLite consensus disorder prediction 327 343 - -
Ahy13g1431 459 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 421 - -
Ahy13g1431 459 Coils Coil 159 193 - -
Ahy13g1431 459 MobiDBLite consensus disorder prediction 283 303 - -
Ahy13g1431 459 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 421 IPR045868 GO:0046872
Ahy13g1431 459 MobiDBLite consensus disorder prediction 58 99 - -
Ahy13g1431 459 Gene3D - 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1431 Ahy-Chr13 18311144 18318699 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Ahy13g1431 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1431 - - adu:107477805 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1431 13 18311144 18318699 Ahy13g1431 13 18311144 18318699 ECH