Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1418 ATGTTCCAACCAAACATGACTGAAGCTGTTGGTGGCCTTCACTATCATCATCAGTATCATCCTTTTGATATGGCTCAGAACACAACAACATCGGAGAGTGATGTACCGAGAATTCGAGAGGACGAGTTATTCGACAGCGCCACCAAGTCCGGCAGTGAGAACCTTGAGGTTGAAGGTGGTGGAGGAAGTGGTGGTGGTGGTGAAGGTGGTTCTGCTGGGGAAGACCAAAACCCTCGCCCTAATAAGAAGAAACGCTATCACCGCCACACCCAACACCAGATCCAAGAGATGGAAGCTTTCTTTAAGGAGTGCCCTCACCCAGATGACAAGCAAAGGAAGGAGCTGAGTAGGGAGTTAGGGTTAGAGCCATTGCAAGTGAAGTTCTGGTTCCAGAACAAACGCACTCAAGTGAAGACTCAAACTGAAAGGAGCGAGAACTCACAGCTTAGAGCGGAAAATGAGAAGCTTAGAGCAGATAACATGAGGTATAGGGAAGCACTAAGCAATGCATCGTGCCCTAGTTGTGGTGGCCCAACCGCCATAGGGGAAATGTCATTCGATGAACATCACCTCAGGCTTGAAAATGCACGTCTTAGGGAAGAGATTGATCGAATTTCAGCAATTGCAGCCAAGTACGTAGGCAAGCCTGTGGTGAACTATTCAAACCTCTCCCCTTCCCTCCCACCTCGGCCGCTAGAACTCGGCGTTAGCGGTGGCAGTGGCGGCTTTGGAGGTGGTAGTGACATGTACAGTGGTGGTGCCGGAGACTTCCTGAGGTCGATAAACGGGCCCTCGGAAGCAGACAAGCCGCTGATAATTGAGCTGGCTGTTGCAGCCATGGAGGAGCTAGTTGGGATGGCACAAATGGGTGAGCCACTTTGGTTGACAATGACCTCCATTGACGGTGGCACTTCCACTGTGCTCAACGAGGATGAGTACGTCAGAACCTTCCCTCGTGGAATTGGCCCCAAACCTGCTGGGTTCCGATCCGAAGCTTCTAGAGAAACCGCTGTTGTTATCATGAACCATGTTAACCTCGTCGAAATTCTCATGGATGTGAACAATTGGTCGACAATGTTCTCTGGTATAGTCTCAAGAGCTATAACTATAGAAGTGCTATCAACAGGAGTTGCTGGGAACTACAATGGTGCCTTACAAGTGATGAGTGCAGAATTACAAGTACCTTCTCCACTTGTGCCAACTCGAGAGAGCTATTTTGTGAGATATTGTAAGCAGCATGTAGATGGGAGTTGGGCAGTGGTGGATGTGTCGTTGGATCATTTGCGCCCTGGTCTTACTCCAAGATCTAGAAGAAGGCCTTCTGGTTGCTTAATCCATGAAATGCCCAATGGTTATTCTAAGGTGACATGGGTTGAGCATGTGGAAGTGGATGATAGAGGTGTTCCTAACCTTTACAAGCAGCTTGTAAACTCTGGGCATGCATTTGGTGCAAAACGTTGGGTTGCAACTTTGGATAGACAATGTGAGAGGCTTGCTAGTGCCATGGCAACAAACGTTCCTACCGTAGATGTTGGAGTGATAACAAACCAAGAAGGGAGGAAGAGTATGCTGAAGCTGGCAGAGAGAATGGTGATGAGCTTTTGTGGTGGAGTGAGTGCGTCAACAGCACACACGTGGACAACGCTGAATGGGACAGGTGTCGATGATGTCAGAGTCATGACACGAAAGAGCGTTGATGATCCTGGAAGACCACCTGGCATTGTTCTAAGTGCTGCCACTTCCTTTTGGCTTCCAGTTCCTCCCAAAACAGCCTTTGATTTCCTCCGTGATGAGAATTCAAGAAGTGAGTGGGATATTCTTTCAAATGGTGGAGCAGTGCAAGAAATGGCGCACATTGCAAATGGAAGAGATACCGGAAATTGTGTGTCGCTACTTAGAGTCAATAGTGCAAATTCAAGCCAGAGCAACATGTTGATACTACAAGAGAGTTGCACAGATTCAACAGGCTCCTTTGTAGTTTATGCTCCTGTGGACATTGTTGCCATGAATGTGGTTTTGAATGGAGGGGACCCAGATTATGTGGCACTTCTTCCTTCAGGATTTGCCATCCTCCCCGATGGAAGTTCTGGCGGCTGCGGCACCGGCATTGGTGGTGAAACAAATGGCCCTACTGGCGGAGGCGGTGGTGGCGGAGGTGGTTCTCTATTGACGGTTGCATTCCAAATATTGGTTGATTCAGTTCCAACGGCTAAGCTTTCTCTTGGGTCAGTTGCAACCGTTAATAGTCTTATTTCTTGCACTGTTGAGAGAATCAAGGCTTCTTTATCTGGTGATCCTGCTTCACTATGA 2310 0.4835 MFQPNMTEAVGGLHYHHQYHPFDMAQNTTTSESDVPRIREDELFDSATKSGSENLEVEGGGGSGGGGEGGSAGEDQNPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQVKTQTERSENSQLRAENEKLRADNMRYREALSNASCPSCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNLSPSLPPRPLELGVSGGSGGFGGGSDMYSGGAGDFLRSINGPSEADKPLIIELAVAAMEELVGMAQMGEPLWLTMTSIDGGTSTVLNEDEYVRTFPRGIGPKPAGFRSEASRETAVVIMNHVNLVEILMDVNNWSTMFSGIVSRAITIEVLSTGVAGNYNGALQVMSAELQVPSPLVPTRESYFVRYCKQHVDGSWAVVDVSLDHLRPGLTPRSRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVPNLYKQLVNSGHAFGAKRWVATLDRQCERLASAMATNVPTVDVGVITNQEGRKSMLKLAERMVMSFCGGVSASTAHTWTTLNGTGVDDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKTAFDFLRDENSRSEWDILSNGGAVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGSSGGCGTGIGGETNGPTGGGGGGGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLISCTVERIKASLSGDPASL* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1418 769 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 25 764 IPR042160 -
Ahy13g1418 769 Gene3D - 71 157 - -
Ahy13g1418 769 ProSiteProfiles 'Homeobox' domain profile. 80 140 IPR001356 GO:0003677
Ahy13g1418 769 CDD START_ArGLABRA2_like 269 496 - -
Ahy13g1418 769 SUPERFAMILY Bet v1-like 267 499 - -
Ahy13g1418 769 ProSiteProfiles START domain profile. 265 500 IPR002913 GO:0008289
Ahy13g1418 769 SMART HOX_1 81 144 IPR001356 GO:0003677
Ahy13g1418 769 Pfam Homeodomain 83 138 IPR001356 GO:0003677
Ahy13g1418 769 Coils Coil 139 166 - -
Ahy13g1418 769 SUPERFAMILY Homeodomain-like 70 140 IPR009057 -
Ahy13g1418 769 SUPERFAMILY Bet v1-like 516 759 - -
Ahy13g1418 769 Pfam START domain 275 497 IPR002913 GO:0008289
Ahy13g1418 769 MobiDBLite consensus disorder prediction 27 91 - -
Ahy13g1418 769 SMART START_1 274 497 IPR002913 GO:0008289
Ahy13g1418 769 CDD homeodomain 83 140 IPR001356 GO:0003677
Ahy13g1418 769 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 25 764 - -
Ahy13g1418 769 Gene3D - 327 497 IPR023393 -
Ahy13g1418 769 ProSitePatterns 'Homeobox' domain signature. 115 138 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1418 Ahy-Chr13 17934322 17944415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1418 1 767 Homeobox Transcription Factor Family AT1G05230 72.917 0.0 1117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy13g1418 START 1.80E-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1418 K09338 - gmx:100809556 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1418 13 17934322 17944415 Ahy13g1418 13 17934322 17944415 ECH
Ahy18g0740 18 8124715 8131168 Ahy13g1418 13 17934322 17944415 PCT
Ahy8g1522 8 32001455 32007996 Ahy13g1418 13 17934322 17944415 PCT
Ahy13g1418 13 17934322 17944415 Ahy18g0740 18 8124715 8131168 PCT
Ahy13g1418 13 17934322 17944415 Ahy8g1522 8 32001455 32007996 PCT