Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1417 ATGGAGCACGCACCTGATAATGGAGGCAGCAATGGCAGTTTCAACAGTGGCACAAGAGAAGTGCGACCACCGGATCTTGAAGTGGATGATAAAATGGAAGAAAGAGTATTCTTTGATGAGATGATAGAAGAGTCAGATGATACAGAGGAATTTCAAGGAATGTATCAAGATGAAATTGAGCAGGAAGCTGTGAATTCTGAGGATTTAGGGGAGCAAGAATTTCAAGCAATGTTTGATGGGAATGATTTTTCACATGAGGTGGATGAATTATATCGAATAGAAGATATTGAAAATATTGCCATGGTTGATTTTCTGAACATAAGTGCTCATGAGATGGAATGTTTTCATTTTCCTAATCTTCAGATAGCATTCGATTTCTATAACCATTATGCAAAATCTGTTGGTTTCGGTGCTAGAAAAAGTAAGACTTGGAAAAATAGCAAAGGAGAATATGTGAAGCAATTGTTTGTGTGCTCTCGTGAGGGATTTAGACCAGAGAAATATTATAATATGGAAAACAGAAAAAGGGAGCCAAAATCTGAGACTCGTTGTGGTTGCCTGGCTAGGTTTGTAGTTCGTTTTGTGGCTTACACTGGAAGATGGCATGTGGCTTTGTTTGTTGAATCGCACAATCATGATTGCCTTGATCCTAGGTTAGTTGGTTTCCTTCCTACACATAGAAAAATGGCAGAAGCTGATGCTAGTCAAATGAACAACATGAAGGATGCAGGCATTAGCACACCCCATATATATGCTATGTTAGCTAATCAAGCAGGTGGTTATGAAAATGTTAATTATACCTTAAGGGATATGTATAATGAGATTGCTAGGCGAAGGCGTCATGTCCTGGGTGATGCTAGAGCGGCATTGCGATACCTCAAAAACCAGAAATCTGAAGATACAAACCTCTATTATGAGCACATAGTTGATGCTAAAGGGGTATTGCGAGCTTTATTTTGGTGTGATGGAAGAAGCCAATTAGATTATGAAGTATTTGGAGATGTGCTTGCCTTTGATGCGACATACAAGAAGAACAAGTACTTGTGTCCGGTAGTAGTATTTTCCGGTGTGAATCATCACAACCAAACAGTGGTATTTGGAAGTGCTCTAGTTACCGATGAGAGTAAGGAGGTCTACGTGTGGTTATTACAGCAATTATTGGCAGCCATGAAGGGAAAAGCACCTGTATCTGTGATTACAGATGGTGCTCCATCAATGAGATTTGCAATTGAGACGGTATTCCCAAATGCCCATCATAGATTATGTGCTTGGCACCTCATTCGGAACGCCACAAGTAACGTTGGAAATCCAAAATTTACATCTATGTTTAAGAAGTGCATGCTAGGAGATTATGAAATTAGTGTGTTTGAGCAGAAGTGGTTTGGAATGGTTGAGGAGTTTGGTGTAGCTGAAAAGAATTGGATTATTGACATGTACGAGAAAAGGCATATGTGGGCCACTGCACATATTCGAGGCAAGTTTTTTGCAGGATTTAGGACAACTTCTCGATGCGAAGGTTTGCACTCTATTATTGCAAAATATGTTAAATCTCAATACAATTTGGTTGATTTCATAAAGCATTTTAAGCGGTGTCTTACCTACCTAAGATATAAGGAGGTTGAAGCTGACTATGTTTCCATATCTGGTCTTCCAGTACTTAAAACAGCATTAGAACCTCTGGAAAGGTCTGCATCAAATTTCTATACACGAGAGATATTTTTTATATTTCGAGGCATGCTTGTTAGGGCTGCAAGAATGAAGGTTGTGCAAGATGTGGCATTTGATTCATTTGTACTTTATACAATATCTAAATATGGAAGTCTAAATAGTTCATGGGAGGTGTCTGTAGATAATGAAAGGACGAAATTTAATTGTTCATGCTTAAGGATGGATTCTTTTGGAATTCCGTGTGAGCATATAGTTTGTGTGTTGGTGTTTCTTAACATCCTTGAGCTGCCAAAGTCTCTTGTGTTGACAAGATGGTCGAAGAATGCCAAGACAAGCACTTTCGATTCAAGTGGCGTTACTTGGGAGTCTATAATATTGAGTCAATATGGTTGCTTGATGGATTGGTGTCGGCAGTTGTCCTATGTCGCTAGTCGAAGGCAGGAGAGATTCCACCTTGTTCGAGATACTGTTATGAGCCTAATCGAAGATTTCAAGATTGAAGATGAACAAGAAAAGCAAGTTGGTGCTGAAGCTGATTATTCAGATGGTATTTTTCCTAAGAATCCACAAAATTGTAGGTCTAAGTGTCGTCCTGGTGAGAAGGTAAAACGAAAACCACAACGATGTAGTATTTGTCGCATGGAAGGACACAATAAAAAATCTTGTCCATTGGCAAAGGACATTCAGCAGCAGACCAATGCAACTTCTTATGGTATAAATAGGAACCATGTTGAGGAAGGTTTGGATGCAGATGCAGAAATGGAATTTTGGGCATCTGATCTTGAAGAAGATTATGAAGAACAAGAGTTTTGGGCAGGAGATTCTGATGCAAGTGCCGACATGGAACTTAGTGAAGAGTTCTCGATGTAG 2538 0.3932 MEHAPDNGGSNGSFNSGTREVRPPDLEVDDKMEERVFFDEMIEESDDTEEFQGMYQDEIEQEAVNSEDLGEQEFQAMFDGNDFSHEVDELYRIEDIENIAMVDFLNISAHEMECFHFPNLQIAFDFYNHYAKSVGFGARKSKTWKNSKGEYVKQLFVCSREGFRPEKYYNMENRKREPKSETRCGCLARFVVRFVAYTGRWHVALFVESHNHDCLDPRLVGFLPTHRKMAEADASQMNNMKDAGISTPHIYAMLANQAGGYENVNYTLRDMYNEIARRRRHVLGDARAALRYLKNQKSEDTNLYYEHIVDAKGVLRALFWCDGRSQLDYEVFGDVLAFDATYKKNKYLCPVVVFSGVNHHNQTVVFGSALVTDESKEVYVWLLQQLLAAMKGKAPVSVITDGAPSMRFAIETVFPNAHHRLCAWHLIRNATSNVGNPKFTSMFKKCMLGDYEISVFEQKWFGMVEEFGVAEKNWIIDMYEKRHMWATAHIRGKFFAGFRTTSRCEGLHSIIAKYVKSQYNLVDFIKHFKRCLTYLRYKEVEADYVSISGLPVLKTALEPLERSASNFYTREIFFIFRGMLVRAARMKVVQDVAFDSFVLYTISKYGSLNSSWEVSVDNERTKFNCSCLRMDSFGIPCEHIVCVLVFLNILELPKSLVLTRWSKNAKTSTFDSSGVTWESIILSQYGCLMDWCRQLSYVASRRQERFHLVRDTVMSLIEDFKIEDEQEKQVGAEADYSDGIFPKNPQNCRSKCRPGEKVKRKPQRCSICRMEGHNKKSCPLAKDIQQQTNATSYGINRNHVEEGLDADAEMEFWASDLEEDYEEQEFWAGDSDASADMELSEEFSM* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1417 845 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 117 701 IPR031052 GO:0006355
Ahy13g1417 845 MobiDBLite consensus disorder prediction 1 30 - -
Ahy13g1417 845 ProSiteProfiles Zinc finger SWIM-type profile. 612 648 IPR007527 GO:0008270
Ahy13g1417 845 SMART 26again6 623 650 IPR006564 GO:0008270
Ahy13g1417 845 PANTHER OS02G0262500 PROTEIN 117 701 - -
Ahy13g1417 845 Pfam MULE transposase domain 335 429 IPR018289 -
Ahy13g1417 845 Pfam FAR1 DNA-binding domain 125 215 IPR004330 -
Ahy13g1417 845 MobiDBLite consensus disorder prediction 823 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1417 Ahy-Chr13 17926346 17929829 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g1417 MULE 1.90E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1417 - - adu:110280242 1425.61