Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1380 ATGGAGTATATGTATAAAAGCATCCCTGGGCGTAGCTGCGTCTTCTTCTTTCTGAAGCTCAAGGACTGCAACTGCACATCTCGGCAACGATTCGAATTCGCATTATTCCCTTCACATTGTTTTGCACATTGCTCCTGCTTCGTTGAAACCAGATTGACCAAAATGTTCACTTCAAGGAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAGTTTGAGGAGACAGTTGCACAGTACGTGTTTGATTTGGAGAACACTAATCAGGACCTGAAAAGTGATTTGAAAGATCTTTACATAAACCAGGCAATTCAAATGGACGTGGCTGGGAATCGCAAGGCTGTGGTCATCTATGTTCCTTTCAGATTGAGGAAGTCGTTCCGCAAAATTCATCTTCGTCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTTGTGTTGATCGCCACAAGAAGGATCGTGCGTCCTCCAAAGAAAGGGTCTGCTGTTCAGCGGCCCCGTACCCGCACTTTGACTGCTGTGCATGATGCTATTCTTGAAGACGTAGTTTATCCTGCCGAGATTGTTGGCAAACGAGTCAGATACAGACTCGACGGATCAAAAATAATCAAAGTTTTCTTGGATCCGAAGGAACGCAACAACACTGAATACAAGCTGGAGGCTTTCTCTGGAGTTTACAGGAAGCTTACCGGAAAAGATGTATCTTTTGAGTTTCCAATCACAGATGCCTAG 738 0.4444 MEYMYKSIPGRSCVFFFLKLKDCNCTSRQRFEFALFPSHCFAHCSCFVETRLTKMFTSRKKIHKDNDAEPTEFEETVAQYVFDLENTNQDLKSDLKDLYINQAIQMDVAGNRKAVVIYVPFRLRKSFRKIHLRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVYPAEIVGKRVRYRLDGSKIIKVFLDPKERNNTEYKLEAFSGVYRKLTGKDVSFEFPITDA* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1380 245 Pfam Ribosomal protein S7e 61 240 IPR000554 GO:0003735|GO:0005840|GO:0006412
Ahy13g1380 245 PANTHER 40S RIBOSOMAL PROTEIN S7 36 244 - -
Ahy13g1380 245 ProSitePatterns Ribosomal protein S7e signature. 133 146 IPR000554 GO:0003735|GO:0005840|GO:0006412
Ahy13g1380 245 PANTHER 40S RIBOSOMAL PROTEIN S7 36 244 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1380 Ahy-Chr13 17156001 17157803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1380 55 245 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 77.487 4.89e-112 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1380 K02993 - gmx:100500684 358.221