Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1375 ATGGGTTTTCGTTTAGCTGGTATCAGAAGAAAGCTATCATTTAATTCAAACCAAGCATCTTCAAAGGCTTTGGAAGTCCCAAAAGGCTATCTTGCTGTCTATGTTGGAGAGAATATGAAGCGGTTCGTGATTCCCATTTCGTATTTGAACCAGACATCATTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGTGAGGAAACCTTCTTGGACCTCACTTCTTGCTTCAACTGA 276 0.4058 MGFRLAGIRRKLSFNSNQASSKALEVPKGYLAVYVGENMKRFVIPISYLNQTSFQELLSQAEEEFGYDHPMGGLTIPCSEETFLDLTSCFN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1375 91 Pfam Auxin responsive protein 9 88 IPR003676 GO:0009733
Ahy13g1375 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 91 - -
Ahy13g1375 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1375 Ahy-Chr13 17034491 17035098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1375 18 90 Calmodulin-binding Proteins AT3G43120 52.055 7.83e-22 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1375 K14488 - aip:110269930 177.948