Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1374 ATGGGTTTTCGGTTACCTGGTATTGTAAGAAAGGCATCATTTACTTCATCTTCAAAAGCTATGGAAATTCCAAAAGGTTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCCATATCATACTTGAACCAGCCTTCATTTCAAGACTTGCTAAGTCAAGCTGAGGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGTGAAGAAAATATGTTCTTAGATATCACTTCTCGCTTGAGTTGA 267 0.3783 MGFRLPGIVRKASFTSSSKAMEIPKGYLAVYVGEKMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCEENMFLDITSRLS* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1374 88 Pfam Auxin responsive protein 16 86 IPR003676 GO:0009733
Ahy13g1374 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 87 - -
Ahy13g1374 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 87 IPR003676 GO:0009733
Ahy13g1374 88 Coils Coil 86 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1374 Ahy-Chr13 17026465 17027292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1374 22 80 Calmodulin-binding Proteins AT3G43120 55.932 3.05e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1374 K14488 - gmx:100806671 146.747