Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1372 ATGCCGAGTCCATTGTCTTATTTACTCTCTATAAACACAAACATTGCATACACACTCCTCTCTCTCTCTCTCTCTCGTTCTCTCTTTCTCGCCATGGGAGGAGATGCTGCAGGACTCTCCATGGATTCTTCCGATCCGATCCGGAGGTTCTTCCTTGGCAGTAATAGCCCTGTTATTCTCAACTCTTTTCCTCAAGACAAGTGGAATCATGAAAGCGCCACCACCACCGCCTCTTTTCAACAAGTCAACCTTTCGAATCACGATCATCATCACAACACGAGACAAGAGTTAGACTTCTTCGTCACTCATCACAACGACGACAACCGTATCGCCTCTTCTTCTTTCCCTGCCGCCGACCACGATAACAATCATCGTCATTCCTTGGAATTCAAAGTAAACACTGGTCTGAATCTTCTCACTACCAGCACTACGGAGGACGATCACGTAAATTTGCAAGACAGAAGAACTAAACTTGAGGAGGTAGGTGTAATTGAAGCGGAGATAGAGCGAGTGAAGGAGGAGAATGAAAGGATAAGGGAGATGATTGATGAGGCAAACAGTCATTACAGTGCGCTTCAGATGCACCACATGAATCTCATGAACAAGAGCAGTGACGATGAAAGAGTATTGGTTCCAAGGCAGTTTATGGATCTAGGCTTAGCAACAAATTCGCACAATTGTTCATCATCACGATCAAGATCAAAATCACCATCAGGGAATAGTAGTGGTGGTGATGGAGAGAAGAAGAGAATGAAAAGAGAAGAAAGCCCGATGAGGGAAGAAGAAGCAAACAAAATAGAGAGGTCAAGTAGTCCAGCAAAACATAATCTTGACCAAGCTCACGAGGCCACTATGAGGAAAGCTAGAGTTTCTGTTAGAGCCAGATCAGAGGCACCTATGATAACTGATGGGTGTCAATGGCGAAAGTATGGACAGAAGATGGCTAAAGGAAACCCATGCCCTCGAGCTTATTATCGTTGCACCATGGCTTCCGGTTGTCCAGTTAGGAAACAGGTGCAAAGGTGTGCAGAGGATAGAACAGTGTTAGTGACAACATATGAAGGGAAGCACAACCACCCTTTGCCACCGGCAGCAATGGCTATGGCGCAAACAACTTCCTCAGCCGCAACAATGCTTCTTTCTGGTTCATCAATGTCAACCAATGACAACACCACCCTAATCAACAATGCAACAAACTTCTTAGCAACAACACTTCTTCCATCTTCTTCATCATCATCATCAGCTGCTACTTCAACCATGGCAACAATCTCAGCTTCAGCACCATTCCCAACTATCACATTGGACCTTACTCATGATGACTCCCCCATCAACAACAACAACAACCACCCTTTTCAGTTCCCAATAAGGCCTAGTACAATTCCACAAATACCCTTCAACATATTTGGTGGTAATAGTAGTAATAATAATAGCAATAACCAATCAAAGTTTTGTGGTCTACAAATGCCTAATAATAATAATAAAGATCATAGTAATAGTAGTAGTAGTAGTAACAATCTTGTTGATACAGTTGGTGCTGCAATTGCATCTGATCCAAACTTCACTGCTGCTTTGGTATCAGCTCTTAGCTCCTTTATTAGTGCTGCTGCTCCTACTCAACAAAACAACATTAGCAATAGCAATGACAATGGCAATGGCACACTCAACAACAATAGCTAG 1677 0.4329 MPSPLSYLLSINTNIAYTLLSLSLSRSLFLAMGGDAAGLSMDSSDPIRRFFLGSNSPVILNSFPQDKWNHESATTTASFQQVNLSNHDHHHNTRQELDFFVTHHNDDNRIASSSFPAADHDNNHRHSLEFKVNTGLNLLTTSTTEDDHVNLQDRRTKLEEVGVIEAEIERVKEENERIREMIDEANSHYSALQMHHMNLMNKSSDDERVLVPRQFMDLGLATNSHNCSSSRSRSKSPSGNSSGGDGEKKRMKREESPMREEEANKIERSSSPAKHNLDQAHEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDRTVLVTTYEGKHNHPLPPAAMAMAQTTSSAATMLLSGSSMSTNDNTTLINNATNFLATTLLPSSSSSSSAATSTMATISASAPFPTITLDLTHDDSPINNNNNHPFQFPIRPSTIPQIPFNIFGGNSSNNNSNNQSKFCGLQMPNNNNKDHSNSSSSSNNLVDTVGAAIASDPNFTAALVSALSSFISAAAPTQQNNISNSNDNGNGTLNNNS* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1372 558 Coils Coil 161 188 - -
Ahy13g1372 558 MobiDBLite consensus disorder prediction 466 504 - -
Ahy13g1372 558 MobiDBLite consensus disorder prediction 245 293 - -
Ahy13g1372 558 Gene3D WRKY domain 286 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g1372 558 PANTHER OS05G0567200 PROTEIN 73 552 - -
Ahy13g1372 558 MobiDBLite consensus disorder prediction 539 558 - -
Ahy13g1372 558 Pfam WRKY DNA -binding domain 303 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g1372 558 MobiDBLite consensus disorder prediction 221 298 - -
Ahy13g1372 558 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 73 552 IPR044810 GO:0003700
Ahy13g1372 558 SMART WRKY_cls 301 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g1372 558 SUPERFAMILY WRKY DNA-binding domain 294 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g1372 558 MobiDBLite consensus disorder prediction 221 243 - -
Ahy13g1372 558 ProSiteProfiles WRKY domain profile. 296 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1372 Ahy-Chr13 17012772 17016839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1372 96 532 WRKY Transcription Factor Family AT1G62300 45.738 1.64e-112 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g1372 WRKY 6.20E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1372 - - ahf:112737496 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1372 13 17012772 17016839 Ahy13g1372 13 17012772 17016839 ECH
Ahy13g1372 13 17012772 17016839 Ahy14g0484 14 6391828 6394299 ECH
Ahy18g0707 18 7481845 7484123 Ahy13g1372 13 17012772 17016839 PCT
Ahy8g1499 8 31527429 31529640 Ahy13g1372 13 17012772 17016839 PCT
Ahy13g1372 13 17012772 17016839 Ahy18g0707 18 7481845 7484123 PCT
Ahy13g1372 13 17012772 17016839 Ahy8g1499 8 31527429 31529640 PCT