Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1332 ATGGCAACGTACTTTCATGGCGGCAACAGTGGCAGTTCGGATATTCATCATCATCAATCTTCCGCAGAAGGAGGGGGATTGCAGACACTCTTTCTCATGAATCCAAACAACTACGTACCTTTCTCCTCTGACACCGCACAAAATCCAACACCAAACATGCTCTTCCTCAATCCCAACAATAGTACTACTACTCCCCACGCGCTCAACCTCGCAAGTCTCACTCACGCGCCGCCCCAACAACAAATTATCGGAGTTGCTTCAAATAATATCCTAGGACCTGCAGGCGGTGGCAATGAGATCTCCGGCTTCCATGGCTTTGTGGGGCCCACACCACGTGTTCATCACTACAATTGGGGATCCATCATGGATCAAACCGCTCTTTCTTCTTCCTCTTCTTCTGTTGTTGCAGCAACCGTGACTGTTCTTCCGAATAACCGTGACTATTCGGAACATACAGTTACAACTGCAACAACAGAAATGGGATTTCATAGAGCGAGAGGCCATCAATCCCATCATCATCCGCAAGGGTTGTCACTTAGTCTTTCCTCTCAACAACTTCCGTTTAGGTCTTTTGCCAACGCCGGTGGGGCTTTGAATAGTAGTATACAAAGTGTTGTACTTGGATCCAAGTTTCTGAAAGTGGCACAGGAGCTTCTTGATGAAGCCGTTAACGTGGGTAACGATAATAAGGTGGATTATTCCAACAATAAAGAGAAGATGAAAGGGAATAAAAATGTTGAATCCACGTCTGATGGTGGCGGTGATGATAATAGATCAAGTGGTGGGGGCGACGGTGAAAATAGTGGTGGTGACAACAAGCAAGGAAGTGAACTCAACACTGCTCAAAGACAAGAGCTTCATATGAATAAGTCCAAGCTTGTTACCATGCTTGATGAGGTGGAGCAAAGATACCGAGAGTACAAGCAACAAATGCAAATTGTGACGTCATCATTTGAGGAAGCAGCTGGTTATGGAGCTGCAAGAACATACACAGCACTTGCATTGAAGACAATATCGAAGCAATTTCGGTGCCTAAAAGATGCAATATCTTTGCAGATCAAAACGACTGGCAAGACGCTAGGTGAAGACAACTGCATGGGAGTTAAAGTCGAGGGTTCAAGGCTTAGATTCATTGATCACAATCTCCGGCAACAAAGGGCGCTTCAACAGTTGGGAATGATACAACACAATGCTTGGAGACCACAAAGAGGATTGCCCGAACGAGCGGTTTCTATTCTTCGAGCTTGGCTTTTCGAACATTTTCTTCACCCTTATCCAAAGGACTCCGATAAGGTTATGCTTGCAAGACAAACTGGACTTACTCGGAGCCAGGTATCAAACTGGTTTATAAATGCCCGAGTTAGGCTATGGAAACCAATGGTTGAAGAAATGTACTTAGAAGAAATTAAGGATCAAGAACACAACAACAATAATGGCTCCCAAGATGATGATGATGATGACACTAACACCGCCAACAAGAAGAAGAAGCAGCTAATAAGAGAATCATCAAACAAGGAATTATGGTCATCATCATCATCACAATTAGAACAACCACCATGTAGTAGTAGTGTCATTAGACTTGACCACTTAAACTCCAACCAAAACACCACTACTCCAATAACTGAGATCTCAGCAAATTCCAACAACAATTCAATCTCAACATCTCCATTGAATCTAAGGAATCCTCATCATGAGATTATGAACTCTCCAGCAGGTAGCATCCTTTCTGTGGACATGGAAATGAAGCCGATAAGAGAGACAAATAGCAACAACAACAACAACCACCTAAATTTTGGAATTGAATTAGGGAACCCTAATAAAGACGGTTACCCTTTGATGGCTTCTTTTGGGAATGAAAACCACGACGGTGGCGGGGGTAGCGGTAGCGGTTATGGTTCTACTACATTCTCCATGGAAGACATTGGAAGGTTCCATCAACAATTGGTGGCTCCAAGGTTCCATGGGAATGGTGTTTCACTCACTCTAGGGCTTCCACCAAGTGATAACAACAACACCAACAATAACTTTCCATCCCAACAAGTAGAGTTTCTCTCCTCACACAACATGCATTTGGGAGGAGGAGGAGGAGGAGGAGGAAGGATTCATCATCATCATCACGAGATTGAAGCAGCAACCAATGATGATGAGTTTTGTGGAATGAAGAACAATGCCACAACACCTTCTTCTCATTCAGGAACAAGTTATGATCATAACAACAACAACATTGACATGCAAAATCGGAAGAGGTTTGCTTCTCATCAATTGTTGCGTGATTTTGTGGCCTAG 2286 0.437 MATYFHGGNSGSSDIHHHQSSAEGGGLQTLFLMNPNNYVPFSSDTAQNPTPNMLFLNPNNSTTTPHALNLASLTHAPPQQQIIGVASNNILGPAGGGNEISGFHGFVGPTPRVHHYNWGSIMDQTALSSSSSSVVAATVTVLPNNRDYSEHTVTTATTEMGFHRARGHQSHHHPQGLSLSLSSQQLPFRSFANAGGALNSSIQSVVLGSKFLKVAQELLDEAVNVGNDNKVDYSNNKEKMKGNKNVESTSDGGGDDNRSSGGGDGENSGGDNKQGSELNTAQRQELHMNKSKLVTMLDEVEQRYREYKQQMQIVTSSFEEAAGYGAARTYTALALKTISKQFRCLKDAISLQIKTTGKTLGEDNCMGVKVEGSRLRFIDHNLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQEHNNNNGSQDDDDDDTNTANKKKKQLIRESSNKELWSSSSSQLEQPPCSSSVIRLDHLNSNQNTTTPITEISANSNNNSISTSPLNLRNPHHEIMNSPAGSILSVDMEMKPIRETNSNNNNNHLNFGIELGNPNKDGYPLMASFGNENHDGGGGSGSGYGSTTFSMEDIGRFHQQLVAPRFHGNGVSLTLGLPPSDNNNTNNNFPSQQVEFLSSHNMHLGGGGGGGGRIHHHHHEIEAATNDDEFCGMKNNATTPSSHSGTSYDHNNNNIDMQNRKRFASHQLLRDFVA* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1332 761 Coils Coil 290 317 - -
Ahy13g1332 761 MobiDBLite consensus disorder prediction 535 554 - -
Ahy13g1332 761 MobiDBLite consensus disorder prediction 227 276 - -
Ahy13g1332 761 SUPERFAMILY Homeodomain-like 400 465 IPR009057 -
Ahy13g1332 761 ProSiteProfiles 'Homeobox' domain profile. 396 459 IPR001356 GO:0003677
Ahy13g1332 761 MobiDBLite consensus disorder prediction 470 521 - -
Ahy13g1332 761 Gene3D - 395 472 - -
Ahy13g1332 761 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 21 684 - -
Ahy13g1332 761 Pfam Homeobox KN domain 416 455 IPR008422 GO:0003677|GO:0006355
Ahy13g1332 761 Pfam Associated with HOX 205 350 IPR006563 -
Ahy13g1332 761 SMART HOX_1 399 463 IPR001356 GO:0003677
Ahy13g1332 761 MobiDBLite consensus disorder prediction 246 276 - -
Ahy13g1332 761 MobiDBLite consensus disorder prediction 470 502 - -
Ahy13g1332 761 MobiDBLite consensus disorder prediction 503 521 - -
Ahy13g1332 761 CDD homeodomain 399 460 IPR001356 GO:0003677
Ahy13g1332 761 MobiDBLite consensus disorder prediction 1 22 - -
Ahy13g1332 761 SMART prehox3 200 351 IPR006563 -
Ahy13g1332 761 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 21 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1332 Ahy-Chr13 16165292 16172692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1332 1 761 Homeobox Transcription Factor Family AT2G35940 39.136 2.00e-114 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Ahy13g1332 POX 1.40E-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1332 - - aip:107629786 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0674 18 6971590 6975865 Ahy13g1332 13 16165292 16172692 PCT
Ahy8g1474 8 31113591 31117580 Ahy13g1332 13 16165292 16172692 PCT
Ahy13g1332 13 16165292 16172692 Ahy18g0674 18 6971590 6975865 PCT
Ahy13g1332 13 16165292 16172692 Ahy8g1474 8 31113591 31117580 PCT