Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1328 ATGGTTGGTGTTCATCTTCATCAGATCAAAGCTTGCAACTTTCTCTCCTTCTTCTGCATGATGATGATGATCACAGTTTGTTACGGTGCTACAGACCCAAATGATCTCAAAATTCTGAATGATTTCAGAAAAGGATTGCAAAATCCCGAGCTTCTCAAATGGCCAGAGAATGGAGTAGGTGACCCATGTGGCAATCCTCCATGGCCTTATGTGTATTGCAATGGTGACAGGGTGACACAGATTCAGTCAAAGAATCTTGGTCTCAAAGGTTCACTCCCTCAGAATTTGAACCAGCTCACAGAACTCCAGAATTTGGGTCTCCAAAGGAACAACCTCAGTGGGGTTTTACCAAGTTTCAATGGATTGTCCAAATTGGAATATGCTTTCTTGGATTACAATGAATTTGACACAATCCCTTTTGATTTCTTCAAAGGACTCACAAACATAAGGATCTTGTCTTTGGAAATGAATCCTTCTTTGAATGCAACCACAGGGTGGTCTTTTCCTTTGGACTTGAAAGAATCATTGCAATTAACCAATCTCTCTTTTGTGCACTGTAATTTGGTTGGACCATTGCCTGAATTTCTAGGCACATTGCCTTCGCTTTTGAATCTGAGGCTCTCATACAACAGAATCTCTGGTGGAATCCCAAACAGTTTTGGCCAATCTTCAATTCAGGTTTTGTGGCTTAACAATCAAGAAGGTGGTGGCATGAGTGGTTCTATTGATGTTATTGCCTCAATGACTTTTCTTACACAGCTTTGGCTTAATGGAAACAAGTTCAATGGGGAAATTCCAAACAACATTGGGAATTTAACTTCCTTGAAGGAGATCAACCTCAATGGAAACCAACTTGTTGGTTTGATTCCGGAATCAATGGCAAACATGGACCTTGATCAAGTTGATTTAAGCAATAACATGTTAATGGGGCCAATACCAAAGTTTAAGGCTGCTACACAAGTATCTTATGGTTCAAATTTCTTTTGTCAGAGTAAGCCTGGGATTCAATGTGCACCTCAAGTTAATGCACTCATTGATTTTCTCCATGGTCTGAATTACCCTTCAATTCTGAGTTCTCAATGGTCTGGTAATGATCCTTGTGGAGGGAACTGGATTGGATTGAGCTGCAATCAGAACTCTGAGGTATCTCTTATCAATTTGCCTAGGAGAAATCTTAGTGGTACATTGAGTCCTTCAATTGCTAAGTTGAATTCACTTGTTAAGATTATGCTTGCACAAAATAACATAAGTGGCAAAGTCCCTAGTAATTTTACTGAATTGAAATCACTGAGTTTGTTGGATTTGAGTTATAATAATTTTGAGCCTCCATTGCCAAAGTTCAATGATGGTATGAAGGTTGTTATTGATGGCAACCCTCTTTTTGCTGATCAACACGGAAAGAGTCCCTCACCTATTAGTAGTCCACAACCTTCACCCCCGAATCCGGCATCACCACGGCCTCTGCTCTCTCTGCCACCAAAACCAAAACCAACACCCTCGCATATGCCGCCTTCCCATGCTCCGGTTCAAAGATCAAATGGCTCGAAAAGATCGAAATTGGTAGTATTACTTGTTGGTGTTGGAATCTTTACATTTGTGGCTGTTTTGCTTGTTTCTCTATTTGTATGTTGTTTGAAGAAGAAAAAGGCTCCTAGCAGTCTTAATCCTCACACTCATGATACATATAACCCAGAAACAATGTTGAAATTCGCAGTTTCGAGCTGTGATGCTGATACCAAGTCAACAAAGACAAGGTTAAGTTCTGTGAGTAACCTGAGTGGTGAAACAGAAAACACTCATATGAGTGATTCTCGAAACCTTGTGATATCAGTACAAGTTCTACGCGAGGTGACGAAGGATTTCGCAGCCGAAAATGAGCTAGGGCGAGGCGGGTTTGGAACGGTTTACAAGGGAGAGCTAGGAGATGGAACGAAGATAGCAGTGAAGAGAATGGAAAATGGAGCTATTAGGAGCAAGGGAGTGGACGAATTCCAGGCGGAAATAGGGGTTCTTTCGAAGGTGCGGCACCGGCATTTGGTGTCGCTTCTAGGCCACGCAATAGAAGGAAATGAAAAACTATTGGTTTATGAGTATATGCCTTTAGGTGCTCTAAGCAAGCATCTATTTGAATGGGAGAGATTGAAATTGGAGCCTCTGTGTTGGTCTCAGAGGCTTGTGATAGCACTTGATGTTGCAAGAGGAATGGAGTACCTTCATGGTTTTGCTCGCCATACCTTCATCCATCGTGATCTCAAGTCTTCCAACATTCTACTTGCTCATGATTTTCGGGCAAAGGTTTCTGATTTTGGTCTTGTCAAACTTGCCCCCGATGGGAACAAGTCTGTGGCTACCAAGCTTGCCGGAACCTTCGGATACCTCGCCCCTGAGTACGCGGTGATGGGTAAAATCACGACGAAAGTGGACGTGTTCAGTTACGGTGTGGTGTTAATGGAACTTCTAACCGGACTAATGGCTCTGGACGAGAACCGGCCAGAGGAGAACCGGTACTTAGCCGAATGGTTCTGGCAAATCAAATCAAGCAAAGAAGAGCTTCTTGCCGCCATAGATCCTGCTCTCAAAGCCACCCAAGACATTTTCGACAGCATCTACATTGTGGCGGAGCTGGCCGGACACTGCACCGCCAGGGAAGCAAACCACCGGCCGGACATGAGCCATGCAGTGAACGTGCTGTCGGCATTGGTGGAGAAATGGCAACCGGTTGACGAAGAAGTCAACGGTGGGTCTGGCGACATTGACTACGGTCAACCGCTTTCGCAGATGTTGAAGGTTTGGAAGGAAGCGGAAGGGAAAGAATTGGGTTACACTAGTCTTGAAGATAGTAAGGGAAGTATTCCAGCTAAGCCTACTGGTTTTGCTGACTCCTTCACTTCTGCTGATGCTAGATGA 2907 0.4365 MVGVHLHQIKACNFLSFFCMMMMITVCYGATDPNDLKILNDFRKGLQNPELLKWPENGVGDPCGNPPWPYVYCNGDRVTQIQSKNLGLKGSLPQNLNQLTELQNLGLQRNNLSGVLPSFNGLSKLEYAFLDYNEFDTIPFDFFKGLTNIRILSLEMNPSLNATTGWSFPLDLKESLQLTNLSFVHCNLVGPLPEFLGTLPSLLNLRLSYNRISGGIPNSFGQSSIQVLWLNNQEGGGMSGSIDVIASMTFLTQLWLNGNKFNGEIPNNIGNLTSLKEINLNGNQLVGLIPESMANMDLDQVDLSNNMLMGPIPKFKAATQVSYGSNFFCQSKPGIQCAPQVNALIDFLHGLNYPSILSSQWSGNDPCGGNWIGLSCNQNSEVSLINLPRRNLSGTLSPSIAKLNSLVKIMLAQNNISGKVPSNFTELKSLSLLDLSYNNFEPPLPKFNDGMKVVIDGNPLFADQHGKSPSPISSPQPSPPNPASPRPLLSLPPKPKPTPSHMPPSHAPVQRSNGSKRSKLVVLLVGVGIFTFVAVLLVSLFVCCLKKKKAPSSLNPHTHDTYNPETMLKFAVSSCDADTKSTKTRLSSVSNLSGETENTHMSDSRNLVISVQVLREVTKDFAAENELGRGGFGTVYKGELGDGTKIAVKRMENGAIRSKGVDEFQAEIGVLSKVRHRHLVSLLGHAIEGNEKLLVYEYMPLGALSKHLFEWERLKLEPLCWSQRLVIALDVARGMEYLHGFARHTFIHRDLKSSNILLAHDFRAKVSDFGLVKLAPDGNKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDENRPEENRYLAEWFWQIKSSKEELLAAIDPALKATQDIFDSIYIVAELAGHCTAREANHRPDMSHAVNVLSALVEKWQPVDEEVNGGSGDIDYGQPLSQMLKVWKEAEGKELGYTSLEDSKGSIPAKPTGFADSFTSADAR* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1328 968 SUPERFAMILY L domain-like 339 447 - -
Ahy13g1328 968 SUPERFAMILY L domain-like 31 317 - -
Ahy13g1328 968 SMART serkin_6 621 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1328 968 PANTHER OSJNBA0070M12.3 PROTEIN 14 968 - -
Ahy13g1328 968 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Ahy13g1328 968 MobiDBLite consensus disorder prediction 472 504 - -
Ahy13g1328 968 MobiDBLite consensus disorder prediction 945 968 - -
Ahy13g1328 968 SUPERFAMILY Protein kinase-like (PK-like) 601 897 IPR011009 -
Ahy13g1328 968 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Ahy13g1328 968 Pfam Leucine rich repeat N-terminal domain 339 377 IPR013210 -
Ahy13g1328 968 ProSiteProfiles Protein kinase domain profile. 621 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1328 968 Gene3D Transferase(Phosphotransferase) domain 1 699 914 - -
Ahy13g1328 968 MobiDBLite consensus disorder prediction 464 513 - -
Ahy13g1328 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 746 758 IPR008271 GO:0004672|GO:0006468
Ahy13g1328 968 Gene3D Ribonuclease Inhibitor 339 464 IPR032675 -
Ahy13g1328 968 PANTHER OSJNBA0070M12.3 PROTEIN 14 968 - -
Ahy13g1328 968 Pfam Protein tyrosine and serine/threonine kinase 624 895 IPR001245 GO:0004672|GO:0006468
Ahy13g1328 968 Gene3D Phosphorylase Kinase; domain 1 581 698 - -
Ahy13g1328 968 CDD STKc_IRAK 627 897 - -
Ahy13g1328 968 Gene3D Ribonuclease Inhibitor 33 334 IPR032675 -
Ahy13g1328 968 SMART LRR_typ_2 272 295 IPR003591 -
Ahy13g1328 968 SMART LRR_typ_2 199 222 IPR003591 -
Ahy13g1328 968 SMART LRR_typ_2 122 145 IPR003591 -
Ahy13g1328 968 SMART LRR_typ_2 248 271 IPR003591 -
Ahy13g1328 968 SMART LRR_typ_2 99 121 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1328 Ahy-Chr13 15907905 15911228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1328 88 909 Receptor kinase-like Gene Family AT1G55610 28.866 2.38e-78 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Ahy13g1328 PK_Tyr_Ser-Thr 8.70E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1328 - - cam:101505581 1324.69