Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1324 ATGGAGTCTCGGATGGATCAGTATGAGATCATGGAACAGATCGGAAGAGGTGCTTTTGGAGCTGCCATCCTTGTTCATCACAAATCTGAGAAGAAAAAATATGTGTTGAAGAAAATCAGGCTTGCTAGGCAGACTGAAAGATGCAGAAGATCTGCACATCAAGAGATGGCTCTTATTGCTAGAATCCAGCATCCTTACATTGTAGAATTCAAGGAGGCATGGGTTGAGAAGGGTTGCTATGTCTGTATTGTTACTGGATACTGTGAAGGAGGAGATATGGCCGAATTGATGAAGAAAACAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAGTTACTCTTGGCAGTGGAATATCTTCATTCAAATTTCGTTTTACATCGTGACCTAAAGTGTTCCAACATTTTTCTTACCAAGGACCAAGATGTTCGCCTCGGGGATTTTGGGCTCGCTAAGACGCTAAAAGCAGATGATTTGGCTTCATCGGTGGTCGGGACTCCCAATTACATGTGTCCTGAACTGCTTGCGGATATTCCTTATGGATTCAAATCTGATATCTGGTCACTAGGGTGCTGTATATATGAGATGGCTGCTCATCGCCCGGCTTTTAAAGCTTTTGATATGGCAGGACTAATAAGCAAGATAAACCGTTCCTCTATTGGCCCGTTGCCTCCTTGTTATTCCCCTTCCTTGAAAACACTGATAAAGGGCATGCTAAGAAAAAGTCCGGAGCATCGGCCAACAGCATCAGAAGTGTTAAAGCACCCTTACTTGCAACCTTATGTTGATCAATATCGTCCGTCTTTTAGTTCTCCAACATCATGTTCTCCAGGAAAACCGATTTCAGCTGTCAATTATTCTAGAAAAAATATGGCTGAAAGTCAAAGCAGTACTAGTTCAAGTAGTGACAAAGACAGTTTGATGTCACATGAGAGACACATTGCAACATCCGTGCCCGAGCATAACAAAGCCACCGAAACAGATATGGCATCAATTGATGACGATAGCTCAGAGAATCTCCTGGCTAGTGAAGAAGAAAACGGCTCTAATAATGTCAATGCTAAAGCAACTGAGCAAGAAGTGATGAAACCATCTTATAATGAGCCATGTTCTAATATTGAATCTAAGCAGCCGAAAACAATTAGAAGTATAATGATGGCGTTAAAAGAAGGAAAACTTAGAGAAGCAACTTCTCCGATGAGAGGCAATCGCATAAAGGTTGGTGGTGTATCAACACCAAAGACTAATATAGAGACGTTGTCCAAATTGCCAAAACCCAATTTCACAGCTCCTGGATTGAAGCCAAATGTAGAGTCCCCAGCTGTTGCGCATCCAAAGGGATCCCCGGACTCTGTAAAACGAATACAAGGATTGCATCCTTCAAAGCATCAGTTGCCAGTGACAGAGTCCTCACCAAAAGCGAAACCTAGGCACGACTTGACTTCGCCATCTGGCAATGTCAAACCAGTAGAGGGAGAAGGACTTCCTGATAGAACATTGCAAAGGACTCCCCCTACCTTAACTAGACGACCTTCATTTCCGGCTCGAATGAGGCCAGTTGGGCTTGATGTTCCAAATGCAACAAATGATAATGGGAAGTCAGGTTCAAATAGAACAGCTCAGGAGCCCGACATTAGCCGTTGTCAGTTGACCAATGGCAATGTACCACATCTTTCTAGACCAGCTGCTAGAGAGCCTCAGAAGGCTTTTGGCCGAAGCTCCAAAGGAATGCAAACAGACAGCAGTAATTCCGCATCATCTTCGGTCTCTATTCAAGGATGTGAAATTTATGATGATGCAACAATTTTTATTGACATGAGAGAAGAAACACTTCCTGATAACGAGAATGTACTCAAAAATGTAGGTGCAGAATCATGCCCACCTACAACCTGTGCACATTGTAAGAAGGTTGAAAACGTTTGCAACAAGACTGGCGAGGTTACCTGGAGTTTTCGGAACACTAATAGTAATGAGAAAATGGATTCAAGGATAAGTCTTGATCTCCCTATTGAAGATTCTGAGGTTACTTCTGCATCAGAAGATAGCCTTCCTGTTAAACATACAAGTATCAATGTTTCCTTTGGATCTGATAATAAATCTGTAGGCCCTTGTGCTGAAGCCGCAGACGAAATCATAGATCATCATGATATTTCTAAGGAAATAACATTAGCCACAACTATCCAACATCCACTTGAAAATTCTGCAGAAAAGCCGGTTTATGGCGGTGTTCTTCCACTAAGGAAGTCTGAAGGTAAGTCTGAAATCGTTTGTCAGCCAGAACCCATGTGTAAGTCCTCTGGGGACGACAAATCCACAGTGAGGGAGCGATTATCATCGGTGTCTGAAACTGCTCCTCTGATTACATCTACTAAGCTATCGAGCCAGAAAGTCTTGCAAGAGAAAGGTACTGTTGTGCAGAATCCAGCACCGGAAAGGCCAGATGCTGGCCATCTTCCTCCGGCCTTTGATGATGTCATCCATGTAATACGGCATAGCAGTTACCGGGTTGGAAATGAGCAGCCAGTTAAGGAATCTGTTGAGAAAGGAGTTCAAAATTTAGATGTTGGTAAGTTCATCAATGTTGTGAGGGATGATGTAGAAGCAAGAAATTCAAGCCCTCCTTTGACATTGAAATCTTCTAGTTCCTCTGAACTGCCAAGCACGAAACCAAATACATCTGATCAGTTCGAAACAAGAAACAATGGCACTCTGCCAATCGTTAAATCTCCAAGTTTCTCTGATGCTTCATGCATGAAATCAACTATGTCTGATCATGCTGGTCTTAAGGAACAAGACAAAAGCAACCCGGTTTCATTAGTTTCAGAATCTAATTCCACCGAGTTAAGTAAACACGATACTCCTACAACCGAAGACAAACCTCCGGTGAAGGAAATACTGGATGTGAAATCTTTCAGGCAGAGAGCCGAGGCACTCGAAGAGCTCCTAGAATTGTCTGCGGAGTTGCTGCAGCAAAATAGATTGGAGGAACTTCAAGTTGTTCTGAAGCCCTTTGGGAAAGACAAGGTTTCGCCAAGGGAGACAGCGATTTGGTTAGCGAGAAGTCTTAAAGGAATGATGTCCGAGGAATGCGGAGGACGCGGTTCATGA 3120 0.4314 MESRMDQYEIMEQIGRGAFGAAILVHHKSEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKTNGAYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKSPEHRPTASEVLKHPYLQPYVDQYRPSFSSPTSCSPGKPISAVNYSRKNMAESQSSTSSSSDKDSLMSHERHIATSVPEHNKATETDMASIDDDSSENLLASEEENGSNNVNAKATEQEVMKPSYNEPCSNIESKQPKTIRSIMMALKEGKLREATSPMRGNRIKVGGVSTPKTNIETLSKLPKPNFTAPGLKPNVESPAVAHPKGSPDSVKRIQGLHPSKHQLPVTESSPKAKPRHDLTSPSGNVKPVEGEGLPDRTLQRTPPTLTRRPSFPARMRPVGLDVPNATNDNGKSGSNRTAQEPDISRCQLTNGNVPHLSRPAAREPQKAFGRSSKGMQTDSSNSASSSVSIQGCEIYDDATIFIDMREETLPDNENVLKNVGAESCPPTTCAHCKKVENVCNKTGEVTWSFRNTNSNEKMDSRISLDLPIEDSEVTSASEDSLPVKHTSINVSFGSDNKSVGPCAEAADEIIDHHDISKEITLATTIQHPLENSAEKPVYGGVLPLRKSEGKSEIVCQPEPMCKSSGDDKSTVRERLSSVSETAPLITSTKLSSQKVLQEKGTVVQNPAPERPDAGHLPPAFDDVIHVIRHSSYRVGNEQPVKESVEKGVQNLDVGKFINVVRDDVEARNSSPPLTLKSSSSSELPSTKPNTSDQFETRNNGTLPIVKSPSFSDASCMKSTMSDHAGLKEQDKSNPVSLVSESNSTELSKHDTPTTEDKPPVKEILDVKSFRQRAEALEELLELSAELLQQNRLEELQVVLKPFGKDKVSPRETAIWLARSLKGMMSEECGGRGS* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 876 924 - -
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 294 377 - -
Ahy13g1324 1039 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1324 1039 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Ahy13g1324 1039 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Ahy13g1324 1039 SUPERFAMILY Protein kinase-like (PK-like) 4 316 IPR011009 -
Ahy13g1324 1039 CDD STKc_Nek 7 262 - -
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 576 593 - -
Ahy13g1324 1039 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1022 - -
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 338 377 - -
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 420 593 - -
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 938 954 - -
Ahy13g1324 1039 Coils Coil 976 1002 - -
Ahy13g1324 1039 Gene3D Transferase(Phosphotransferase) domain 1 90 367 - -
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 309 323 - -
Ahy13g1324 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 872 964 - -
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 294 308 - -
Ahy13g1324 1039 MobiDBLite consensus disorder prediction 531 560 - -
Ahy13g1324 1039 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1022 - -
Ahy13g1324 1039 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1324 1039 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1324 Ahy-Chr13 15817930 15824932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1324 12 286 MAP Kinase Kinase Kinase AT3G06030 31.359 3.74e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Ahy13g1324 Pkinase 1.20E-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1324 K08857 - gmx:100784761 1415.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0658 18 6760394 6766646 Ahy13g1324 13 15817930 15824932 PCT
Ahy8g1461 8 30962343 30968666 Ahy13g1324 13 15817930 15824932 PCT
Ahy13g1324 13 15817930 15824932 Ahy18g0658 18 6760394 6766646 PCT
Ahy13g1324 13 15817930 15824932 Ahy8g1461 8 30962343 30968666 PCT