Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1321 ATGTCCTCCAAGGACTGCGGCCACCACGAAGACGAGAGCCGCAAGCTCATCCGCCTCATCCTATTCGGCGTCGGCGGCTTCTTCTTCGTAGTCCTCCTCACAATATTCATCATATGGGCCGTCCTCAGGCCCACCAAGCCCAAATTCACAATCCAAGACGCCACACTATACGCCTTCAACCTCTCCTCCCCCGCCACCAACACCCTCACCATCACCATGCAAGTCACCCTCTCTTCCCACAACCCCAACCGCCGCATCGGAATCTACTATTCCAACCTCCACGCTTACGCCTCCTACCATAACCAACAGGTAACACTTGCGACCGAGCTTCCCCCAACGTACCAGGGACACAAAGATTTCACCGTTTGGTCACCGTTTCTTTTCGGCGCCGCAGCGCCGGTGTCGCCGTTTACGTTGAGTTCGTTGCAGCAGGACCGGGGTGCGGGTGCCGTCGTGGTCAACGTCAAGATCTACGGAAGGGTCAAGTGGAAGGTGGGGACTTGGGTCTCTGGAAGGTACCATTTGTTTGTGAATTGCCCGGCGTATATAAGGTTCACCGGCGCCGGTGATCGGAGCGGCAGCGGGATCCAGATTGTGGCTCCGGCGAAGTTTCAGCTCTTGCAGGGTTGCAGTGTTGATGTTTAG 645 0.5674 MSSKDCGHHEDESRKLIRLILFGVGGFFFVVLLTIFIIWAVLRPTKPKFTIQDATLYAFNLSSPATNTLTITMQVTLSSHNPNRRIGIYYSNLHAYASYHNQQVTLATELPPTYQGHKDFTVWSPFLFGAAAPVSPFTLSSLQQDRGAGAVVVNVKIYGRVKWKVGTWVSGRYHLFVNCPAYIRFTGAGDRSGSGIQIVAPAKFQLLQGCSVDV* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1321 214 PANTHER OS05G0367900 PROTEIN 6 214 IPR044839 GO:0098542
Ahy13g1321 214 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
Ahy13g1321 214 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1321 Ahy-Chr13 15768888 15770156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1321 41 157 SNARE and Associated Proteins AT1G32270 27.119 6.09e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1321 - - gmx:100819285 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0655 18 6720466 6721665 Ahy13g1321 13 15768888 15770156 PCT
Ahy8g1458 8 30940711 30941859 Ahy13g1321 13 15768888 15770156 PCT
Ahy13g1321 13 15768888 15770156 Ahy18g0655 18 6720466 6721665 PCT
Ahy13g1321 13 15768888 15770156 Ahy8g1458 8 30940711 30941859 PCT