Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1311 ATGATCGAAATGACATCCAATAACCCTTACGAAATCATAGACGATGATGATGAGGGGTTTGATTGGGAAGCAGCTGCAAGAGAAATCGACGTCGTTTGCCAACAAAGCAAGTGTGTTAGCAGCAGTGGCTGTGATGCAAACGGGAAGGCGAAGGCGAAGGGAAACAATGGCGACTCATCCCGGCAATCCACTCTCGATCAGTTTGTGGTCACTGCCAAGAAGGAAGCCCCAGTGCTTCAGGCCCAACACGAAGAAGAAGAAGTCCCAACCTCCGCCATCCACCACATTGATGCCGACGCAGCCAAAACTTGGATATACCCTGTTAATGTTCCTCTCCGCGACTATCAATTTGCCATCACCAAATCCGCACTTTTTTCAAACACATTGGTGGCATTGCCAACAGGATTAGGCAAGACACTTATCGCTGCTGTTGTTATGTATAACTACTTCAGATGGTTTCCTCAAGGAAAAATAGTCTTTACTGCTCCTTCTCGACCACTTGTCATGCAGCAGATAGAAGCATGCCATAATATTGTTGGAATACCCCAGAAATGGACAATTGATATGACGGGTCAAATAAGTCCTCCCAAAAGAGCTTGTTTTTGGAAAACAAAGCGGGTTTTCTTTGTCACCCCACAAGTGTTGGAGAAAGATATTCATTCTGGTATATGCTTAGTAAAGTACTTGGTGTGTTTGGTTATTGATGAAGCTCACAGAGCTACAGGAAATTACTCTTATTGTGAAGCTGTTCGTGAGCTGATGGCTGTACCAGTGCAACTTAGAATATTAGCATTAACTGCAACCCCAGGATCAAAGAAGCAGACAGTCCAGCATGTTATTGATAATCTTCATGTCTCCAAGCTTGAATATCGCAGTGAAGTTAACCATGACGTTATCCCATATGTTCATAACAGGAAGATAGAGTTGGTAGAGGTTGCAATGGGCCAAGATGCTGCAGAAATAAATGATAAGCTTTTGGATGTCATACGTCCAATAGTAGCAAGGCTTAATGATATTGGGGTCATTCAGAATAGAAATTATCGTACTTTGAGCCCTTGTACGTTACTTGAAATAAGGGAAAAGTTTCGTCAAGGACATAGGCAAGACCTTTCTAATATCAACAATGTAGATGTCGAAGGGTATTTTGGGGTTCTTATCACTCTTTATTACATCCATAAGCTACTTTCAAGTCATGGAGTAAGGCCAGCACAAGAAATGCTTGAAAGAAAATTGAAGCAAGGGTTTTTCGCAAAATATATGAGTAAAAATGAAGTTATGCTGAAAGCAAGGCAACTGATGCAGCAAAGCTTGTCTCATGGAGCATCTAGTCCTAAGCTCTCCAAAATGCTAGAAGTACTACATGATCATTTCAAAACCAATGATCCCAAAAGTTCAAGGGTGATTATCTTCTCCAATTATAGAGAGAGTGTCAGGGACATTATGGGTGCACTTGGAAACATTGGGGAACCAGTCAGAGCTACAGAGTTTATTGGTCAAAGTTCAGGGAAAGCAATGAAAGGTCAGTCCCAAAAAGTTCAACAGGCTGTGCTGAAGAAATTTCGGTCCGGTGCCTACAATGTTATTGTTGCTACATCAATTGGTGAAGAAGGTCTAGATATAATGGAAGTTGATCTTGTCATATCTTTTGATGCAAATATTTCACCACTTAGAATGATTCAGCGAATGGGAAGAACTGGAAGAAAGCATGATGGACGAGTTGTAATTTTAGCTTGTGAAGGGTCAGAGTTGAATGGCTACTTGCGGAAGAAGGCAAAGAGCAAGACTATAAGTAAACACATGCGAAATGGGGGTGTAGATAGCTTCAACTTTCATCCTAGTCCAAGAATGATTCCCCATGTCTTCAAACCTGAAGTTCAATATGTTGAGATGTCAATTGAGAAATTTATTCCCCGTGAAAAGAATGTGAAAGATGTCCCTCTTCCATTTTCTCCATCCAAAGATAAACTCACTGTTGCTGAAATGGATTTACTTAAAATGTATTTCCATTCTACTGAGGAAAATACAAGTAGATTGTCTCTCATTGCCTTTCCTTACTTTCAAACCTTTCCTTCTAGAATTCATAAAGTGAAGCATTCCCTTAGAACAATGATGCTTATAGACGCAATGCAGCATTTGCAAGGATTAGAAATGTGTCCCGGAAATGACAAAACTACTCTTCAGGAAGGTTCGTGTTTAGGAAATAGCAAGCCGTTTTCCATTTCTGAGGCCAAACATGACACTGAATCATGCTATAGGCATACAATGGAAAGGAATGTTGACACCGTAAATTGTATGAACTTGGATTCCCATCCTTTGAGGATTAAAACCAAAGATACTATTGATCTAACTATACAAGAAGATAGTACTTTCGATGACTTGATTGAGCATGAAGAGGATTCACTCCAGGGTGATGAGATAGTTCCCGAGACTCCGGTTGCTAATAAAAGTGCATCAAATGGAGGAGATAATGCTGGTGAAACGACCAACCTTTTGGTCAAGACTTCATTGTTTCCAGAAGATGTATGCATTAATGGCATTAGAGAAGGAGAATTTAGTCCTCGCTTAACTGATTTCATTACAAGTGGTGTTGTTCCAGAGTCTCCAGTTGATGATGAACAAGAGAAATCAAGAGGCAAGTCTATAATTCGAGACTGTATTTTGCCTGTTCGACTCCACGAAGAACAGGATACATGTCCCTTGAGTTCTATGCGAAGTGAAAAAGTTGTAATTGAGGGCAGTACTGGAAAGAATGTCTCTGATTCTCCAGTAGATAATGGAACTCGAACTCCTTTACTTGAGTTGAAGAATTCTGCAATTAAAAGACGACGCATCATTATTTCCCAAACTGAGGAAGGTCACTCACACATGTCTGACCCAAGCTTCAGGGAAGAATCACATTTAAGCTCTGGTAAAATGCCTGGAACTGTAAGTATTCAACCTTTGCGCAAATTTAAAAGGTTGCGGAAAGCTGCAGATGGTGACAGCAAAGTTAATCAGGAAAACAATGATCCCACCCGATATAAGCATGTTCAAAGTCATTTTGGTAAAAGGAAATCAACGAATGATGTGAGAGACTTCATTGAGGAGGAAGCTGAGGTTTCTGCAGAGGCAAATGTATCTAGTGACGAAGATGGAGAAGATGATGTTTCTTATGACAGTTTCATTGATGACAGGACAAACCCTATAGGAGAAAGTCAGCCTGAAGTTAGTAGAGTGGACATGATGGCAATTTACAGGCGTTCTTTGCTTAGTCAAACGCAGATAAATGGAAGTTACAGCTCTTCTGCCATGTTCAGCCCTGACAGTGTTACTAATGGAAGTGGGGGCTCTTCAGGCAAGACAGTAATGAGTCATGTTCATGGCAACTGCATAGACCAAGAAAAAGTGCCTTCAACTAGTTCCCTTACAGGAAACGTTACAAGTCGTAAAAGATTGTCCCTTTATCATTCAGGAGGACACCTTCCAACTATGAACCTTGAACAAGAATTTGCACTTCAATCAAAGAAAGACTTGGTGGATGCCCCTGATTTTACTGTGGATTATCAATGTGATGATCAATTTTATAACGACCTTGATCTTGATGAGTTGGAGGCACAAGCAATCTCACTTCATAAAAAGAAATTAGGTTTGTCAACTCAGAAGCAAGATGCAATCCCTCTACCTCCCTCTCTGAAGGAAGATAGCTTTTGGGCTCCATCGTTTGACCTCGGCATATGA 3717 0.4079 MIEMTSNNPYEIIDDDDEGFDWEAAAREIDVVCQQSKCVSSSGCDANGKAKAKGNNGDSSRQSTLDQFVVTAKKEAPVLQAQHEEEEVPTSAIHHIDADAAKTWIYPVNVPLRDYQFAITKSALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFTAPSRPLVMQQIEACHNIVGIPQKWTIDMTGQISPPKRACFWKTKRVFFVTPQVLEKDIHSGICLVKYLVCLVIDEAHRATGNYSYCEAVRELMAVPVQLRILALTATPGSKKQTVQHVIDNLHVSKLEYRSEVNHDVIPYVHNRKIELVEVAMGQDAAEINDKLLDVIRPIVARLNDIGVIQNRNYRTLSPCTLLEIREKFRQGHRQDLSNINNVDVEGYFGVLITLYYIHKLLSSHGVRPAQEMLERKLKQGFFAKYMSKNEVMLKARQLMQQSLSHGASSPKLSKMLEVLHDHFKTNDPKSSRVIIFSNYRESVRDIMGALGNIGEPVRATEFIGQSSGKAMKGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRVVILACEGSELNGYLRKKAKSKTISKHMRNGGVDSFNFHPSPRMIPHVFKPEVQYVEMSIEKFIPREKNVKDVPLPFSPSKDKLTVAEMDLLKMYFHSTEENTSRLSLIAFPYFQTFPSRIHKVKHSLRTMMLIDAMQHLQGLEMCPGNDKTTLQEGSCLGNSKPFSISEAKHDTESCYRHTMERNVDTVNCMNLDSHPLRIKTKDTIDLTIQEDSTFDDLIEHEEDSLQGDEIVPETPVANKSASNGGDNAGETTNLLVKTSLFPEDVCINGIREGEFSPRLTDFITSGVVPESPVDDEQEKSRGKSIIRDCILPVRLHEEQDTCPLSSMRSEKVVIEGSTGKNVSDSPVDNGTRTPLLELKNSAIKRRRIIISQTEEGHSHMSDPSFREESHLSSGKMPGTVSIQPLRKFKRLRKAADGDSKVNQENNDPTRYKHVQSHFGKRKSTNDVRDFIEEEAEVSAEANVSSDEDGEDDVSYDSFIDDRTNPIGESQPEVSRVDMMAIYRRSLLSQTQINGSYSSSAMFSPDSVTNGSGGSSGKTVMSHVHGNCIDQEKVPSTSSLTGNVTSRKRLSLYHSGGHLPTMNLEQEFALQSKKDLVDAPDFTVDYQCDDQFYNDLDLDELEAQAISLHKKKLGLSTQKQDAIPLPPSLKEDSFWAPSFDLGI* 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1311 1238 MobiDBLite consensus disorder prediction 39 62 - -
Ahy13g1311 1238 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 19 1202 - -
Ahy13g1311 1238 Gene3D - 108 302 IPR027417 -
Ahy13g1311 1238 Gene3D hef helicase domain 316 437 - -
Ahy13g1311 1238 MobiDBLite consensus disorder prediction 948 965 - -
Ahy13g1311 1238 PANTHER FANCONI ANEMIA GROUP M PROTEIN 19 1202 IPR039686 GO:0006281|GO:0043138
Ahy13g1311 1238 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 445 616 IPR001650 -
Ahy13g1311 1238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 581 IPR027417 -
Ahy13g1311 1238 SMART helicmild6 479 569 IPR001650 -
Ahy13g1311 1238 MobiDBLite consensus disorder prediction 1035 1051 - -
Ahy13g1311 1238 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 119 287 IPR014001 -
Ahy13g1311 1238 SMART ultradead3 108 308 IPR014001 -
Ahy13g1311 1238 Pfam Helicase conserved C-terminal domain 451 568 IPR001650 -
Ahy13g1311 1238 Gene3D - 438 603 IPR027417 -
Ahy13g1311 1238 MobiDBLite consensus disorder prediction 948 1065 - -
Ahy13g1311 1238 Pfam Type III restriction enzyme, res subunit 125 269 IPR006935 GO:0003677|GO:0005524|GO:0016787
Ahy13g1311 1238 CDD SF2_C_FANCM_Hef 443 577 - -
Ahy13g1311 1238 CDD DEXDc_FANCM 110 291 IPR044749 GO:0005524
Ahy13g1311 1238 MobiDBLite consensus disorder prediction 985 1031 - -
Ahy13g1311 1238 CDD FANCM_ID 319 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1311 Ahy-Chr13 15591783 15602557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1311 418 567 Eukaryotic Initiation Factors Gene Family AT3G13920 27.632 2.07e-07 53.1