Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1308 ATGGCTTTCACTGCGAGTCCTCAGATTCTGTTACACAATCCCATATTAGGAAGAGGAGCAAGGTGGTTGAGAGGGAGAGTAACACCATCCACAAACACCGATTATATTAGTTTGCAGGTGCAGGCTTCCAAGGGCCCTGGCAACAAAAGAAGAGCACCCCCTTCCCCTGGAGTGGACACAAGAATCCACTGGCAAAATGAAAATGAAGGTTGGGTTGGAGGTAGTAACAAACAACAATCCACCGCAGACAATAAGAACCCTAAGAACCTCTTAGGAGAATCATTTGCTGATTTGCTCAGCGCTTCCTCAGGTTCCCATTACGAATTCTTAGGAGTATCGGCAGATGCGGATTTAGAAGAAATCAAAACAGCTTACCGGAGATTATCAAAGGAGTACCATCCAGACACAACTTCTCTGCCTCTCAAAACTGCTTCAGAAAAATTCATGAAACTCAGGGAGATCTACGATGTTCTTAGCGACGAAGAGACTCGAACGTTCTACGATTGGACTCTGGCTCAAGAGGCTGCAAGCCGCCAAGCAGAAAAGATAAAAATGAGATTAGAGGATCCTTTTGAGCAACAACTCAGAAACTATGAATCTGTTCCAGACATGGTTGACCGTCTTGGTGGGAAGAATATGAAACTTAGCGATCAAGCTGTTTCTGCCCTCACTATTGATGTCTTCATCATTGTTTTTGCCATTTGTTGCATCATTTATGTAACAATATTCAAAGCACCATATTATTATTAG 750 0.432 MAFTASPQILLHNPILGRGARWLRGRVTPSTNTDYISLQVQASKGPGNKRRAPPSPGVDTRIHWQNENEGWVGGSNKQQSTADNKNPKNLLGESFADLLSASSGSHYEFLGVSADADLEEIKTAYRRLSKEYHPDTTSLPLKTASEKFMKLREIYDVLSDEETRTFYDWTLAQEAASRQAEKIKMRLEDPFEQQLRNYESVPDMVDRLGGKNMKLSDQAVSALTIDVFIIVFAICCIIYVTIFKAPYYY* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1308 249 Pfam DnaJ domain 106 168 IPR001623 -
Ahy13g1308 249 MobiDBLite consensus disorder prediction 69 87 - -
Ahy13g1308 249 CDD DnaJ 106 160 IPR001623 -
Ahy13g1308 249 ProSiteProfiles dnaJ domain profile. 105 171 IPR001623 -
Ahy13g1308 249 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 32 247 IPR044618 -
Ahy13g1308 249 PRINTS DnaJ domain signature 143 163 IPR001623 -
Ahy13g1308 249 PRINTS DnaJ domain signature 107 125 IPR001623 -
Ahy13g1308 249 PRINTS DnaJ domain signature 125 140 IPR001623 -
Ahy13g1308 249 ProSitePatterns Nt-dnaJ domain signature. 148 167 IPR018253 -
Ahy13g1308 249 SUPERFAMILY Chaperone J-domain 103 174 IPR036869 -
Ahy13g1308 249 Gene3D DnaJ domain 93 190 IPR036869 -
Ahy13g1308 249 SMART dnaj_3 104 163 IPR001623 -
Ahy13g1308 249 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1308 Ahy-Chr13 15560897 15562052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1308 106 173 C2H2 Transcription Factor Family AT1G74250 38.889 6.89e-09 53.9