Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1281 ATGGCTAACTCCTCCTTCTGCCTCCTCCTCTTCATTCTCTTCTGCTTCCTCTCTTCTCTTACCATCATAAATACACTTTCAACTGTTTCCATCTCCGAGACTTCCAACCAAACATTTATTTGTGCCTTACAGAATCCCAACCGACAAGTACAAGGACAATCTAACCTTAACTGTACAAGCTTTCCACCTGGAATCTCTCTTCAACTGAATCGTAACCTCTCATATGCTGAAATTGCTGGTGGCAGTGGATTCCTATGTGCATTGAGGACACCATCTTCTTCTAACTCCATCATGGGTTGTTGGAGATTCTCTGCCAATGCTACCAATGTTCCTTTCAAGCGTCTCTACCATGGACCTGTAATTCAAAACATGGATGCCGGAAACTCCCATGTTTGTGGCCTTGTAACTCAGAACAATAATAGCCTTAAGTGCTGGCAATGGCCTCGCTTCGATTCAAGCAAGGTCATCAACTTGTCAAGTATTGCTGTGGGAGAGAATTTCGTCTGCGGCTTATCGGAGTCATCAGGCAAGGTTACTTGCAGTGGTGGTGATACCGGAGTTGTTGGTAAGGAGCCTGGTGGCGAGCACTCTGCCATTGCAGCCGGGTTTAGGCATGCTTGTGCCATCTCCATTGATGGAAGCTTGGATTGCTGGGGTGACGTGGATCAGAAACCGCAGGGTAAGTTTGTTGATTTGGCCTTGGGAGAGAACCGAAGTTGTGCACTTAGAGAAAATAGAACTGTTGCTTGTTGGGGACAGAATAATTTCAGGATTCCAGAGAGATTTGAAGGGACTTTCTTTGTGGCAATTGTGGCAAAACGAAGTGTTTTCTGTGGAATTGTGTCTTCTAATTTTAGTTTGGTATGTTGGGGTGCTAAGTTTTTTGATACAAATGCTGAGGTGTTTCAAAATGTCCTCCCAGGACCTTGTAGGAGTAATTGCCCATGCGGAATCTTAATAGGTTCTGCCACACTATGCTCTTCAGGAATGTCAATTTGTACATCTTGTTCCCCAAGAAATGAGGCTGGTTCGCCCTCGCCATCGCCACCACCCACAAGTAGTCCGACCGGGACTACAAAAAGTAGTGGATGGAGCAAGAAGATGGTTGCATTCTTGGTGATTGGATGTGTTGGTTGCAGTTCCCTGCTGCTAGTGTTTTGTTTCTTCATTTACTGGCACTGCAAGGGTAAAGGAGGCCGCGTCCACGACTCTGGGCGATTGGACGAATCAGGGACTGGGAGCGCCTCGCCAAGCCATCCGGAAGGCGGAGGCGGCCGTGGAGTTCTAGAGAAGCGTTTAAGCCACGTGATCAGCTTGGGAAACGGGAGCCATTTGGAGGAATACAGCCTTCAAGTGCTTCTTGAAGCCACCAACAATTTCTCAGAGGACAAGAAAATAGGGACAGGTAGCTTTGGGTCTGTATACCATGCCACACTGCAAGAAGGCAAGGAAGTCGCCATAAAAAGAGCCGAAAACTCTCCCCATTCGCCGTCCAATGCCACCAGAAGGCAGGAAGACAAGGACAGTGCATTTGTGAACGAGCTAGAGAGCCTCTCTAGGCTCCACCACAAGAATCTGGTGAGGCTATTGGGGTTCTATGAGGACGCCAACGAGCGCATATTGGTTTACGAGTACATGAACAATGGAAGCTTAAACGAGCATCTCCACAAGCTTCATACTTCAGCATTAATGTCTTGGGCCGTGCGCATCAAAGTAGCACTTGATGCAGCAAGAGGCCTAGAGTACCTTCACCAATACGCAACCCCACCAATCATTCACCGCGACATAAAATCATCAAACATACTGTTAGACTCAAAGTGGACTGCCAAAGTTTCTGATTTTGGACTCTCCCTCATGGGTCCTGAAGACGAAGAGTCGCATCTTTCGCTCCTCGCTGCCGGCACGGTTGGTTACATGGACCCTGAATACTACAGGCTTCAAATGCTAACTACAAAGAGCGATGTCTACAGTTTCGGAGTAGTGCTGCTGGAAATTCTGTCTGGCCACAAGGCCATACATAAAAATGAGAATGGAGTCCCAAGAAACGTGGTGGATTTCATGGTGCCATATATTAATCAAGATGAGCTTCACAGGGTGCTGGACCCAAGAGTGCCGCCGCCAACGCCCTACGAGATAGAGGCGGTGGCGTACGTTGGTTATTTGGCAGCAGATTGTGAGGCTGGAGGCAGAGATCGTCCAACAATGACCGAAGTTGCAAATTACTTGGAAAAAGCATTGGCTGTGTGTTTGGCCAAACCATCCATGTCAAGATCCACAACCAACACTTCTGATGAATGA 2298 0.4765 MANSSFCLLLFILFCFLSSLTIINTLSTVSISETSNQTFICALQNPNRQVQGQSNLNCTSFPPGISLQLNRNLSYAEIAGGSGFLCALRTPSSSNSIMGCWRFSANATNVPFKRLYHGPVIQNMDAGNSHVCGLVTQNNNSLKCWQWPRFDSSKVINLSSIAVGENFVCGLSESSGKVTCSGGDTGVVGKEPGGEHSAIAAGFRHACAISIDGSLDCWGDVDQKPQGKFVDLALGENRSCALRENRTVACWGQNNFRIPERFEGTFFVAIVAKRSVFCGIVSSNFSLVCWGAKFFDTNAEVFQNVLPGPCRSNCPCGILIGSATLCSSGMSICTSCSPRNEAGSPSPSPPPTSSPTGTTKSSGWSKKMVAFLVIGCVGCSSLLLVFCFFIYWHCKGKGGRVHDSGRLDESGTGSASPSHPEGGGGRGVLEKRLSHVISLGNGSHLEEYSLQVLLEATNNFSEDKKIGTGSFGSVYHATLQEGKEVAIKRAENSPHSPSNATRRQEDKDSAFVNELESLSRLHHKNLVRLLGFYEDANERILVYEYMNNGSLNEHLHKLHTSALMSWAVRIKVALDAARGLEYLHQYATPPIIHRDIKSSNILLDSKWTAKVSDFGLSLMGPEDEESHLSLLAAGTVGYMDPEYYRLQMLTTKSDVYSFGVVLLEILSGHKAIHKNENGVPRNVVDFMVPYINQDELHRVLDPRVPPPTPYEIEAVAYVGYLAADCEAGGRDRPTMTEVANYLEKALAVCLAKPSMSRSTTNTSDE* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1281 765 MobiDBLite consensus disorder prediction 343 362 - -
Ahy13g1281 765 Gene3D - 66 308 IPR009091 -
Ahy13g1281 765 SMART serkin_6 460 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1281 765 PANTHER OJ000114_01.11 PROTEIN 6 754 - -
Ahy13g1281 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Ahy13g1281 765 SUPERFAMILY RCC1/BLIP-II 112 294 IPR009091 -
Ahy13g1281 765 ProSiteProfiles Protein kinase domain profile. 460 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1281 765 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 6 754 IPR044815 GO:0004674
Ahy13g1281 765 ProSitePatterns Protein kinases ATP-binding region signature. 466 488 IPR017441 GO:0005524
Ahy13g1281 765 Gene3D Transferase(Phosphotransferase) domain 1 546 756 - -
Ahy13g1281 765 Pfam Regulator of chromosome condensation (RCC1) repeat 198 220 - -
Ahy13g1281 765 Pfam Regulator of chromosome condensation (RCC1) repeat 230 256 - -
Ahy13g1281 765 SUPERFAMILY Protein kinase-like (PK-like) 440 743 IPR011009 -
Ahy13g1281 765 MobiDBLite consensus disorder prediction 403 427 - -
Ahy13g1281 765 CDD STKc_IRAK 466 744 - -
Ahy13g1281 765 MobiDBLite consensus disorder prediction 488 508 - -
Ahy13g1281 765 Pfam Protein kinase domain 460 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1281 765 Gene3D Phosphorylase Kinase; domain 1 429 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1281 Ahy-Chr13 15141047 15143701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1281 25 760 Receptor kinase-like Gene Family AT5G47850 51.837 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Ahy13g1281 Pkinase 6.00E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1281 - - pvu:PHAVU_011G003100g 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1281 13 15141047 15143701 Ahy13g1281 13 15141047 15143701 ECH