Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1272 ATGTCCATAACCGAGGAAAGTGACCGACCCGACCCGTCCGCTAAACGGGGCACCCAGAAACGTTCCCGCCAGCGCGATACCGCATTCCGCGGGGTTCGAAAACGCAGCTGGGGACGCTACGTCTCCGAGATCAGAATGCCCGGCCAGAAAACCCGTGTATGGCTCGGCTCATTCGGCTCGCCTGAGATGGCGGCTCGTGCATACGACTCCGCCGCTTTCTTCCTCAAAGGAAACTCCGCCACCCTCAATTTCCCCGACCTTGTTCACTCGCTGCCACGCCCTCTCTCGTCGTCCAGGCGTGACATACAGTCGGCGGCGGCCAAAGCGGCCGTGGAGGTGGTGGATGCACGGAGCGGGCATGACCCGACCCGGTCGCCCGGGAAGGCGGATTCGGTGGAGTGGTGGGAAGGTTTGTTGGGAGAAGAGGAAGAGTCAGAGTCGGTTTGGAGAACGACGTGGTTTGAGGATGTGAAGGAATGTGGTCCTATGAATCTCAGTCCTGCAGGTTCTGTTGGAGAATTGACATGGAACGAAGTCTTCAATTTCAACGACGACGTTCTGTTATTCTCCTAA 573 0.5829 MSITEESDRPDPSAKRGTQKRSRQRDTAFRGVRKRSWGRYVSEIRMPGQKTRVWLGSFGSPEMAARAYDSAAFFLKGNSATLNFPDLVHSLPRPLSSSRRDIQSAAAKAAVEVVDARSGHDPTRSPGKADSVEWWEGLLGEEEESESVWRTTWFEDVKECGPMNLSPAGSVGELTWNEVFNFNDDVLLFS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1272 190 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Ahy13g1272 190 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Ahy13g1272 190 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Ahy13g1272 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 132 - -
Ahy13g1272 190 MobiDBLite consensus disorder prediction 1 31 - -
Ahy13g1272 190 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
Ahy13g1272 190 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Ahy13g1272 190 Gene3D AP2/ERF domain 28 86 IPR036955 GO:0003700|GO:0006355
Ahy13g1272 190 CDD AP2 29 87 IPR001471 GO:0003700|GO:0006355
Ahy13g1272 190 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Ahy13g1272 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF036-LIKE 18 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1272 Ahy-Chr13 14976704 14977643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1272 14 110 AP2-EREBP Transcription Factor Family AT5G11590 56.436 1.17e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy13g1272 AP2 8.80E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1272 K09286 - gmx:100783790 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1272 13 14976704 14977643 Ahy13g1272 13 14976704 14977643 ECH