Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1268 ATGGGTTCTTCTAATAACGGTGGTGTGCCACCGGGGTTTCGATTTCATCCAACCGATGAGGAATTGCTTCATTACTACTTGAAGAAGAAGGTGTCGTTTCAGAAGTTTGACATGGATGTTATTAGAGAGGTCGACCTCAACAAGATGGAGCCTTGGGACTTGCAAGAAAGATGCAGAATAGGGTCAACACCACAAAACGAGTGGTATTTCTTCAGCCACAAGGATAGAAAGTACCCAACAGGGTCAAGGACAAACCGAGCAACGAACGCAGGGTTCTGGAAAGCCACGGGAAGAGACAAGTGCATAAGGAACACCTACAAGAAGATTGGGATGAGAAAGACACTTGTGTTCTACAAAGGTAGAGCCCCTCATGGCCAGAAGACTGATTGGATAATGCACGAGTACCGCCTTGAAGATTCCAATGATCCACAAGCAAATGCCAACGAAGATGGGTGGGTGGTGTGCAGGGTGTTCAAGAAGAAGAACCTATTCAAGATTGGAAATGAAGGAGGTGGTGGCTCCACACACACCTCATCGGACCAGCAACTCAACAACTCAACGGCCACCAATGCTCGTTCCTTCATGCAAAGGGAAAACCACTACCTACTGCAAAACCCTAGGAATGGGAACCCATCCTCTTCATCCTCAGGCTTTGATGAACTCGATAAACCCGAGCTCGGTCTCCATCACTATCCTCACATGCAAACCCCACACTATTCACTCTTCCATCACTCCCAACCACTTCTTCATCCCCAGGCCCACAAGCCCATCGTCTATGACTACTCTTATGCACCCGCCCTTCCTTCAGACCCTCCTGTCATCGCTAAGCAGCTCATGACTAACCCTAGAGACTGCGATAGCGGTGGCAGCGAGGGTCTGAGGTACCAGCAGGTTTCCGAGCCTGGTATGGAGGTTGGATCATGTGAACAAGCCCAGGAAATGGGCGCCGCAAGAGGAGGAGGAGAAGGAATGAATGAATGGGGTGTGCTTGATAGGCTTGTAACCGGGAACCTTGGAAATGAAGATTCAGCCAACAAAGGGATTAGGTTTGAAGATGCAAATCCACATCAGATTAACCAGCTTTCTTTGAGGGGAGAGATGGATTTCTGGGGCTATGGGAAACAATAA 1128 0.4876 MGSSNNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDSNDPQANANEDGWVVCRVFKKKNLFKIGNEGGGGSTHTSSDQQLNNSTATNARSFMQRENHYLLQNPRNGNPSSSSSGFDELDKPELGLHHYPHMQTPHYSLFHHSQPLLHPQAHKPIVYDYSYAPALPSDPPVIAKQLMTNPRDCDSGGSEGLRYQQVSEPGMEVGSCEQAQEMGAARGGGEGMNEWGVLDRLVTGNLGNEDSANKGIRFEDANPHQINQLSLRGEMDFWGYGKQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1268 375 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Ahy13g1268 375 MobiDBLite consensus disorder prediction 203 219 - -
Ahy13g1268 375 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Ahy13g1268 375 MobiDBLite consensus disorder prediction 203 225 - -
Ahy13g1268 375 ProSiteProfiles NAC domain profile. 9 160 IPR003441 GO:0003677|GO:0006355
Ahy13g1268 375 PANTHER PROTEIN BEARSKIN2-LIKE 5 254 IPR033519 -
Ahy13g1268 375 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 254 - -
Ahy13g1268 375 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1268 Ahy-Chr13 14914754 14916926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1268 3 371 NAC Transcription Factor Family AT1G33280 52.646 2.33e-123 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy13g1268 NAM 2.80E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1268 - - adu:107477630 759.599