Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1256 ATGGATTATGCAATGATTCGTTCTTCTAACTCCAAGTGTGTTGTGACAATCCTTCTGGTAATTGTTTTAACCGTCACAAATTTTGGTGAAGCAAAAGGGAGAGAATTCCGACAATCAAACACAGTATTCATTAGAAGCTCATGTAGCTCCACAACATACCCAAAACTATGCTACACTTCGCTGGTGAAGCATGCGGCATTCATTCAAACAAACCCCGTTCTTCTAACGGGGACAGCCCTCAATGTCACTCTTTCCTCGGCCAAATCGACCTCGGCCGCCATGTCCACGATGGCGAGGAGCGGCAGCCTGAGGGGGAGAGACGCGGCGGCTATGCAGGACTGCATGGAGGTTTTGGCTGATTCCGTGGAGGAGCTCACAAAATCGATTGGAGAAATGAGTCATTTGAGGACAAGTAATTTTGAAGGAACCATGAGTGATGTTCAAACTTGGGTCAGCGCTGCTTTGACCGATGATACCACCTGCACTGATGGCTTCCAACAGACCCCTAGTTCTGTCGCCGGAGATGTTAAGACCGCCGTCCGTGGCCGCATCATCGAGGTGGCGCAACTCACTAGTAATGCCTTGGCTTTGATTAATCAGCTCGCTAATGGCCATCCTTAA 621 0.4895 MDYAMIRSSNSKCVVTILLVIVLTVTNFGEAKGREFRQSNTVFIRSSCSSTTYPKLCYTSLVKHAAFIQTNPVLLTGTALNVTLSSAKSTSAAMSTMARSGSLRGRDAAAMQDCMEVLADSVEELTKSIGEMSHLRTSNFEGTMSDVQTWVSAALTDDTTCTDGFQQTPSSVAGDVKTAVRGRIIEVAQLTSNALALINQLANGHP* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1256 206 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 201 IPR006501 GO:0004857
Ahy13g1256 206 CDD PMEI-like_3 46 203 - -
Ahy13g1256 206 Pfam Plant invertase/pectin methylesterase inhibitor 43 197 IPR006501 GO:0004857
Ahy13g1256 206 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 203 IPR035513 -
Ahy13g1256 206 PANTHER PECTINESTERASE INHIBITOR 10 9 200 - -
Ahy13g1256 206 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 201 IPR035513 -
Ahy13g1256 206 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 200 - -
Ahy13g1256 206 SMART PMEI_2 39 197 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1256 Ahy-Chr13 14688349 14689302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1256 14 203 Carbohydrate Esterase AT3G05610 27.638 3.67e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1256 - - gmx:100305537 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1256 13 14688349 14689302 Ahy13g1256 13 14688349 14689302 ECH