Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1247 ATGGAGAATATGAATAGTTTTTGTCATGTTCCCCCGGGTTTTAGATTCCACCCGACGGATGAAGAACTTGTTGATTACTACCTTAGGAAGAAGGTTAGTTCAAGGAAGATTGAGCTTGATGTAATCAAAGATGTTGACCTCTACAAAATTGAGCCATGGGACCTTCAAGAGATATGCAGGATAGGAAGAGAAGAGGAGAATGAATGGTATTTCTTTAGCCACAAGGATAAGAAGTATCCAACAGGAACAAGAACAAATAGGGCAACAGCAGCTGGGTTTTGGAAAGCAACGGGAAGAGACAAAGCTATATATTCAAAGCATGATCTCATAGGGATGAGGAAGACATTAGTCTTTTATAAAGGGAGAGCTCCTAATGGACAAAAATCGGATTGGATCATGCACGAATATCGCCTTGAAACCGATGAAAATGCCGCACCACAGGCAAGTTTTAACTCTATATTTTTCGCTCATACAAATATTTGCATACATATATACATATACACATGA 507 0.3905 MENMNSFCHVPPGFRFHPTDEELVDYYLRKKVSSRKIELDVIKDVDLYKIEPWDLQEICRIGREEENEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENAAPQASFNSIFFAHTNICIHIYIYT* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1247 168 Gene3D NAC domain 19 162 IPR036093 GO:0003677|GO:0006355
Ahy13g1247 168 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 7 146 - -
Ahy13g1247 168 SUPERFAMILY NAC domain 7 144 IPR036093 GO:0003677|GO:0006355
Ahy13g1247 168 Pfam No apical meristem (NAM) protein 11 138 IPR003441 GO:0003677|GO:0006355
Ahy13g1247 168 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Ahy13g1247 168 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1247 Ahy-Chr13 14522346 14526189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1247 4 147 NAC Transcription Factor Family AT1G12260 86.806 1.74e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy13g1247 NAM 1.40E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1247 - - ahf:112737392 352.058