Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1243 ATGGACTTGAAATCAAATCACACCCCTGTTCTTGCTGATGCTGCACCCATAACAAAGTCAAGACTGGGTGTGCATTCAAGTTTATTGCCTTACTCCCCAACCGGGGCGACCTTTCCACATGGTATGCTATTGACTATCCCAAGGAAGAAAACTGGACTTCTTGAGGATGTTCGTTCTAGTAGTTGGTTGGATGCCATGAAATCATCTTCTCCTCCCCCCAGGAAGATAACGAAGGATGTTAGTCATGGCTTTGCGTCACATGAATCTGATGCTGCTTATTTTAACTGGCTGCTAAAGTATCCCTCAGCACTTACATCTTTTGAGCAAATTACAAACTATGCAAAAGGGAAGAGAATAGCCTTGTTTCTGGATTATGATGGAACTCTTTCACCGATCGTCGATAATCCTGACTGTGCTTTCATGTCTGACAATATGCGAGATGCTGTTAAAAAGGTGGCTGAATATTTCCCTACTGCTATTATCAGTGGAAGAAGTCGTGACAAGGTATATGAATTTATAGGACTAACAGAACTCTATTATGCTGGTAGTCATGGTATGGACATCATTGGTCCTGTCAGGCAGGCTGTACCTGATAACCACCCTAATTGCACCATTAGGTCTACTGACAAGCAGGGTAAGGAAGTTAATTTATTCCAACCTGCTGCTGAGTTCTTGCCCCTGATTGATGAGGTGTTTGAGTCTCTTGTTGAGAGTACAAAAGATATTAAAGGAGCAAAAGTTGAAAACAATAAATTTTGTGTGTCTGTACATTACCGCAATGTAGATGATAAGAGTTGGGATTTGGTGGGGCAGATTGTCCATGATATTCTGAAGGGCTATCCACGTTTGCGACTAACTCATGGGCGCAAGGTCTTAGAGGTCCGCCCAGTGATTGACTGGGATAAGGGAAAAGCAGTCACGTTTTTGCTCGAGTCACTTGGGCTTAGCAATTGTGATGATGTGCTTCCTATATATATTGGAGATGACAGAACAGATGAAGATGCATTTAAGGTTCTGAGGGAGGGAAATAAAGGTTATGGGATCTTAGTGTCCTCAGCGCCAAAAGAAAGCAATGCAGTTTACTCTCTCCGTGATCCATCAGAGGTGATGGAGTTTCTCAAGTCTCTTGTGGATTCGAAGATTCGAGTCTACCCAATTTGGTTGTCGTGCAGGTTCATACATACACAGGTTCAACGACCCAATACATTTGGAGTAGAGCCCAATGGAAAATATTCATTCCCCCTCTCCTCGAATGAAAGGATTTTGGACCTTTGGATCAAACTTTCATTTGAGGTGTCAGATCCATGTGAATTGTATAGAACTATACACGAAGAGTAA 1338 0.4253 MDLKSNHTPVLADAAPITKSRLGVHSSLLPYSPTGATFPHGMLLTIPRKKTGLLEDVRSSSWLDAMKSSSPPPRKITKDVSHGFASHESDAAYFNWLLKYPSALTSFEQITNYAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRDAVKKVAEYFPTAIISGRSRDKVYEFIGLTELYYAGSHGMDIIGPVRQAVPDNHPNCTIRSTDKQGKEVNLFQPAAEFLPLIDEVFESLVESTKDIKGAKVENNKFCVSVHYRNVDDKSWDLVGQIVHDILKGYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNKGYGILVSSAPKESNAVYSLRDPSEVMEFLKSLVDSKIRVYPIWLSCRFIHTQVQRPNTFGVEPNGKYSFPLSSNERILDLWIKLSFEVSDPCELYRTIHEE* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1243 445 Gene3D - 228 383 IPR023214 -
Ahy13g1243 445 Gene3D - 119 207 IPR023214 -
Ahy13g1243 445 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 380 - -
Ahy13g1243 445 SUPERFAMILY HAD-like 120 377 IPR036412 -
Ahy13g1243 445 Pfam Trehalose-phosphatase 122 367 IPR003337 GO:0003824|GO:0005992
Ahy13g1243 445 CDD HAD_TPP 120 371 - -
Ahy13g1243 445 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 380 IPR044651 GO:0004805|GO:0005992
Ahy13g1243 445 TIGRFAM T6PP: trehalose-phosphatase 218 377 IPR003337 GO:0003824|GO:0005992
Ahy13g1243 445 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 340 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1243 Ahy-Chr13 14486137 14492174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1243 113 378 Trehalose Biosynthesis Gene Families AT1G70290 26.056 6.23e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1243 K01087 - gmx:100819495 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1243 13 14486137 14492174 Ahy13g1243 13 14486137 14492174 ECH