Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1228 ATGAAGACACCTTTCTTCTTTTCCTTCTCCCTCTTCTTCTTCTTCTTCTTCTACTGCCACACCCTACTTGTCTTCTCTGCTACCACCATACCCCTCCAACTCATCTCTCTACTCTCAATAAAATCATCCCTCATAGACCCTAACAACATCCTCCATGATTGGGACCCTTCTTCATCCTTCTCCTCCAACACCGAAAACCAAGACCACCCTATATGGTGTTCATGGACAGGCATCATTTGCCACTCAAAAACATCACAAATCACCACCTTGGACCTCTCAAACCACAACTTCTCAGGCACAATCTCACCCCAAATCAGGTACCTAACTACCCTCAACCACTTGAACCTAAGTCGGAATGTCTTCAGTGGAACCTTCCAAGCTGCAATCTTTGACCTCAGCGAACTCAGGACTTTGGATATCAGCCACAACTCCTTCAACTCAACGTTCCCACCGGTATCTAAGCTCAAGTTCTTGAGAGTCTTAAATGCTTACAGCAACAACTTCATTGGACCTCTCCCACAAGAACTCTCCGTGCTTCGCTTCCTTGAACACCTCAACCTTGGAGGAAGCTACTTCAATGGCACAATCCCACCAAGTTATGGCTCCTTGGCCAGACTCAACTTCTTATACCTCGCCGGGAACTCATTGGTAGGTCCAATTCCACCGCAACTAGGCCACCTCAGACAGCTACAACACATGGAAGTTGGTTACAATCCATTGGAATCAACATTACCAACAGAGTTAGCAATGTTAACAAATCTCAGCTACTTGGACATCTCAAGTACTAACATCACAGGTCCTCTGATTCCAGAACTTGTTGGGAACTTAACAATGCTGGAGACACTGTTGCTGTTCAAGAATAAGTTAACGGGTGAAATCCCAAGAAGCATAGGGAACTTGAAGTTACTGAAAGCTCTTGATTTGTCAGATAACAAACTCACGGGTTCAATTCCGGAAGAAATCTCAATGCTGAAGGAACTCAACTTCTTGGGCTTGGAACTGAACAATCTAACAGGGTCAATTCCACAAACAGTTGGTGACCTTCCAAACTTGAACTTCCTCCTTCTCTTCAACAACTCACTCACCGGAATTCTTCCTCAGAAGCTCGGCTCCAACGGTTTGTTAAAGAAAGTGGATGTTTCAACCAACTTTCTAGAAGGTCCCATTCCTCCAAACCTCTGCAACGGCAACAACCTCAACAGGCTCATCCTCTTCTATAACCGTTTTAACGACTCGCTTCCGAGTTCACTTGTTAACTGTATCTCCCTCTCCAGGGTTCGCATTCAGAATAACCGCTTCAACGGTCAAATTCCATTAGGTCTTGGTCAACTCCCTAACCTGACGTTCCTTGACATCAGCGACAACGAATTCACCGGGAGAATTCCCGAGGATTTCGGCAATGCCGTAAGGCTTCAGTTCTTGAACATCTCCGGCAACGCGTTTGAGAGCGCGTTGCCGAGCAACATATGGAACTCCACCAGCCTCCAGATCTTCTCCGCTGCGGGTTCCAAGATCACCGGTGAGATTCCCGACTTCGTAGGGTGCAAGAACATATAGAGGATCGAGTTGCAGGGGAATTCACTTAACGGAAGCATTCCGTGGGATATTGGAAACTGTGAGAAGCTGATTCAGCTGAATCTGAGTAGAAACTCGCTCACCGGAATCATTCCATGGGAAATCTCAGCGCTGCCTTCGATCACCTACGTGGATCTCTCGCACAACTCGCTCACCGGAACTATTCCTTCGAACTTCAACAACTGCACCACGCTAGAGAACTTCGACGTCAGTTTCAACTCCCTCACCGGACCTATACCTTCGTCGGGGATCTTCCCGAACCTCCACCAGTCGGAATTCTCCGGCAACCCCGGCCTATGCGGCGGCATGGTCGCGAAGCCATGCGCGGCTGAGACGCTAGGCTCGGAGGACAACCAGGTCGACGGTCGACGACAGCAGCCGAGGAAAACTGCCGGCGCGATCGTGTGGATCGTTGCGGCGGCGTTCGGGATCGGAGTTTTCGTCCTCGTAGCGGGGACACGGTGCTTCCACGCGAATTACGGCCGCCGTTTCGGTAACGACGGGCAGGAGATGGGACCGTGGAAGTTAACGGCGTTTCAACGACTGAATTTCACGGCGGAGGATGTGTTAGAGTGTTTGTCGATGTCTGATAAGATCTTAGGGATGGGGTCCACTGGAACGGTTTACAGAGCGGAAATGCCAGGTGGCGACATCATAGCGGTTAAGAAGCTGTGGGGAAAGCAAAAGGAGAATATCCGACGGAGGAGAGGGGTGCTTGCTGAGGTGGAGGTGTTGGGGAACGTGAGGCACAGGAATATAGTGAGGCTGTTAGGGTGCTGCAGCAACAGAGAGTGCACCATGCTGCTTTACGAGTACATGCCCAATGGGAACTTAGATGACTTGTTGCATGGCAAGAACAAGGGTGATAATCTCGTTGCTGATTGGTTCACTAGGTACAAGATTGCCCTTGGTGTGGCGCAGGGGATTTGCTACCTTCACCATGATTGTGATCCTGTTATCGTGCATCGTGATCTAAAACCTAGTAATATATTGCTAGATGCTGACTTGGAGGCCAGGGTGGCGGATTTTGGGGTGGCTAAATTGATCCAGACCGATGAATCCATGTCTGTCATCGCTGGATCATACGGCTACATTGCCCCCGAATACGCCTATACTCTTCAAGTGGATGAAAAGAGTGACATTTACAGCTATGGGGTGGTGTTAATGGAGATCTTAAGTGGAAAACGTTCAGTGGATGCAGAATTTGGAGATGGGAATAGCATTGTTGATTGGGTGAAGTCAAAGATAAAGAGCAAAGATGGGATAGATGATATATTAGATAAGAATGCAGGTTCAGGGTGTTCCTCAGTGAGGGAAGAGATGATACAAATGCTTAGAATTTCATTGCTTTGCACAAGCAGGAACCCAGCTGATAGGCCTTCAATGAGGGATGTAGTGTTGATGCTTCAAGAAGCCAAGCCCAAAAGGAAGTTGCTTGATCTGGATAGTATTGTTATAGGTCGATGTGGCGGCGGCGGGGACAATGTGGTGGTTGGTGGTGGTGAAATTCCTTTGGCACAAAAGGCCACGGCGGAAAGCTAA 3117 0.4857 MKTPFFFSFSLFFFFFFYCHTLLVFSATTIPLQLISLLSIKSSLIDPNNILHDWDPSSSFSSNTENQDHPIWCSWTGIICHSKTSQITTLDLSNHNFSGTISPQIRYLTTLNHLNLSRNVFSGTFQAAIFDLSELRTLDISHNSFNSTFPPVSKLKFLRVLNAYSNNFIGPLPQELSVLRFLEHLNLGGSYFNGTIPPSYGSLARLNFLYLAGNSLVGPIPPQLGHLRQLQHMEVGYNPLESTLPTELAMLTNLSYLDISSTNITGPLIPELVGNLTMLETLLLFKNKLTGEIPRSIGNLKLLKALDLSDNKLTGSIPEEISMLKELNFLGLELNNLTGSIPQTVGDLPNLNFLLLFNNSLTGILPQKLGSNGLLKKVDVSTNFLEGPIPPNLCNGNNLNRLILFYNRFNDSLPSSLVNCISLSRVRIQNNRFNGQIPLGLGQLPNLTFLDISDNEFTGRIPEDFGNAVRLQFLNISGNAFESALPSNIWNSTSLQIFSAAGSKITGEIPDFVGCKNI*RIELQGNSLNGSIPWDIGNCEKLIQLNLSRNSLTGIIPWEISALPSITYVDLSHNSLTGTIPSNFNNCTTLENFDVSFNSLTGPIPSSGIFPNLHQSEFSGNPGLCGGMVAKPCAAETLGSEDNQVDGRRQQPRKTAGAIVWIVAAAFGIGVFVLVAGTRCFHANYGRRFGNDGQEMGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMPGGDIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHGKNKGDNLVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADLEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVKSKIKSKDGIDDILDKNAGSGCSSVREEMIQMLRISLLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDLDSIVIGRCGGGGDNVVVGGGEIPLAQKATAES* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1228 1037 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 1 1023 - -
Ahy13g1228 1037 Gene3D Ribonuclease Inhibitor 245 344 IPR032675 -
Ahy13g1228 1037 Gene3D Ribonuclease Inhibitor 345 638 IPR032675 -
Ahy13g1228 1037 SUPERFAMILY Protein kinase-like (PK-like) 721 993 IPR011009 -
Ahy13g1228 1037 SUPERFAMILY RNI-like 269 605 - -
Ahy13g1228 1037 ProSiteProfiles Protein kinase domain profile. 718 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1228 1037 SMART serkin_6 718 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1228 1037 SUPERFAMILY L domain-like 32 294 - -
Ahy13g1228 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Ahy13g1228 1037 Pfam Leucine Rich Repeat 446 467 IPR001611 GO:0005515
Ahy13g1228 1037 Pfam Leucine rich repeat 531 575 IPR001611 GO:0005515
Ahy13g1228 1037 Pfam Leucine rich repeat 86 144 IPR001611 GO:0005515
Ahy13g1228 1037 ProSiteProfiles Leucine-rich repeat profile. 302 324 IPR001611 GO:0005515
Ahy13g1228 1037 Gene3D Transferase(Phosphotransferase) domain 1 797 1007 - -
Ahy13g1228 1037 PRINTS Leucine-rich repeat signature 562 575 - -
Ahy13g1228 1037 PRINTS Leucine-rich repeat signature 303 316 - -
Ahy13g1228 1037 ProSitePatterns Protein kinases ATP-binding region signature. 724 747 IPR017441 GO:0005524
Ahy13g1228 1037 Gene3D Phosphorylase Kinase; domain 1 697 796 - -
Ahy13g1228 1037 Pfam Protein kinase domain 721 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1228 1037 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 1023 - -
Ahy13g1228 1037 SMART LRR_typ_2 132 155 IPR003591 -
Ahy13g1228 1037 SMART LRR_typ_2 469 492 IPR003591 -
Ahy13g1228 1037 SMART LRR_typ_2 300 324 IPR003591 -
Ahy13g1228 1037 SMART LRR_typ_2 203 227 IPR003591 -
Ahy13g1228 1037 SMART LRR_typ_2 444 467 IPR003591 -
Ahy13g1228 1037 SMART LRR_typ_2 348 371 IPR003591 -
Ahy13g1228 1037 SMART LRR_typ_2 562 585 IPR003591 -
Ahy13g1228 1037 Gene3D Ribonuclease Inhibitor 153 244 IPR032675 -
Ahy13g1228 1037 Gene3D Ribonuclease Inhibitor 34 152 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1228 Ahy-Chr13 14254715 14259471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1228 11 1001 Receptor kinase-like Gene Family AT1G08590 42.618 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy13g1228 Pkinase 4.90E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1228 - - adu:107495590 1964.5