Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1220 ATGGTCATGATTATTGTTCTTCTTGTTCTTGATCTTGCTCTATGTGATGTCACTTCAGGGGTAGCATCAGAATCTGAGGCCTTACTCAAATGGAAACAAAGCCTACCTCCACAACCAATTCTTGATTCATGGGTTATGAATCAAACTAGTCCATGTTCATGGAGAGGGATCACCTGTGATCTTCAAGGGAGTGTGACTACCATAAACTTAGCCTACACTGAACTTTCAGGTACTCTTCACAACCTAAACTTCTCTTCTTTCCCAAACCTTTTGATTCTTGATCTCAAAACAAATAACCTGACAGGAACTATACCACAAAACATTGGTGTCCTTTCAAAACTTCAATTCCTTGATCTTTCTACCAACTACCTCAATGGAACTTTACCTCTTTCTATTGCAAATTTGACTCAAGTTCATGAACTTGACTTGTCAAGAAATGACATAACAGGAATCTTAGACCCTCTTTTGTTTCCTGATTCAAGTGATGATCCAAAAAGAGGCTTAATTAGTATTAGGAAACTTCTATTCCAAGATACCCACTTAAGTGGAACACTTCCTAATGAAATTGGTAACATTAAAAACTTGACTGTTCTAGCTCTTGATGCTAACAATTTCTATGGACCTATTCCACCTTCTTTAGGAAATTGCACACATTTAAGTGTTCTTAGACTTAATGAGAATCAATTCTCAGGTACAATACCTCCTAGTATTGGCAAGTTAACTAACTTAACCGATGTGAGGTTTTTCGCAAATTACTTGAATGGCACGGTTCCTAGAGAACTCGGGAACTTGTCTTCTTTGGTTGTCCTGCATCTTGCTGAGAACAATTTCATTGGTGAGTTGCCACCTCAAGTGTGCAAAGCTGGAAAGCTTGTGAATTTCAGTGCTTCTTCTAACCGTTTCACCGGTCCAATTCCGGTTAGCCTTAGAAACTGTCCAAGCTTATACAGAGTTAGAATTGAATACAACATGCTTACAGGGTATGCTGATGAGGATTTTGGAGTGTATCCTAATCTAACATACATTGATTTCAGCTACAACAGGATTCAGGGTGAGATCTCTTCGAATTGGGCCGGCTGCGAAAACTTGCAGGTACTTAGAATGGCTGGGAATTCCATAAGTGGTAACATTCCGGCCGAGATTTTTCGGCTGAGCCAACTAGCAGAGCTTGATGTATCTTCCAACCAACTTTCTGGAGAGATTCCTCTAGAGATTGGTGGTCCAACAACCTTGTATGAACTGAATTTCAGTGGCAATAGACTTTCTGGTGTGATACCGGCCAAAATTGGAAACCTTTCGAGTTTGCAGTCTTTGGACCTGTCAATAAACATGTTCCTGGGACCAATCCCAAATACAATTGGTAACTTGAACAACTTGATGAAACTGAATTTGAGCAACAATAACTTGAATGGCACAATCCCATACCAAATCGGAAATCTTGCAAGCTTGCAAGATTTCTTGGACTTGAGTTTCAATTCACTTTTAGGGGAAATACCTGATGATCTTGGCAAGCTTGCGAATTTAATAATCTTGAATCTCTCTCATAACAATCTTTCAGGTTCTATTCCTGAATCCATTAGCAAAATGTTGAGTTTGTCATTCATCAACTTTTCCTACAATCATTTGAAAGGTCCTGTGCCGAATGCGCGCATATTCAACTCTTCTAGCACTTCAGATTTGAGCAACAATGAAGACTTATGTGGGTATATCAAAGGTTTGCGACCTTGTGAGGTCTCGATCGATGTGCCTTCAAGCGCAAGTAACAAACACAAGCTTAAGGTTCTTGTCCCACTTCTTGCTTCTTTAGGAGGCGCTTTGTTTCTTTGGTTGGTCTGTTTCGCGATTTTCTTCGTCATCAACAAGCAAAATTTAGGATCAACAAGACGAAATTCGTGGAACAAGAGGCCTAATCCGTTCTCAATTTGGTGCTTCAATGGCAGAATTGTGTATGAAGACATAATGGAAGCTACCAAGAATTTCGACAGCGAATACTGCATAGGAGAAGGAGCATTAGGAAAAGTTTACAAAGCAACTCTGAAAGGAGGTCAAGTATTTGCTGTGAAAAAATTGAAATGTGATGAAGAAAACTTAGACATTGAAAGCATAAAGACATTCAAGAGTGAGGTAGCAGCCATGAATGAAATTCGCCACCGGAACATTGTAAAGCTCTATGGATTTTGCTCTAAAGGATTACACAGATTCTTGATCTATGAGTACATGGATAGAGGAAGCTTGGCAGACATGCTTGAGAATGATGAGAGAGCATTAGAGCTAGAGTGGGCTAAGAGAGTTGACATTGTTAAAGGCGTGGCCAGAGCTTTGTCTTACATGCATCATGATTGTAATCCTCCATTGATTCACAGAGACATTTCAAGCAAGAATGTTTTATTGTCATCTGATCTTAGAGCTCATGTCTCGGATTTCGGCACAGCCAGATTTTTGAAGCCTGATTCGCTAATTTGGACCCCGTTTGCAGGCTCATATGGATATGCTGCTCCAGAACTTGCTTACACAATGGCAGTGACAGAGAAATGTGATGTGTTTAGTTTTGGGGTTTTGACTTTGGAGATTCTAAGTGGAAGGCACCCTGGTGATCTTGTTTCTTATATACAGACTACAACTAACCAAAGTATAAACTTCAAAGATATTTTGGACCCAAGACTCTTACCTCCTAATCATGATAAACATGTTCTTAAGGAATTAGCATTAATTGCTGATCTTAGTCTTTCTTGTTTACAAACAAATCCTCAATCCAGACCAACAATGAGAACTGTGGCTCAGTTGCTTGAAGTGGACACTGCTCATAATTCATGA 2814 0.3962 MVMIIVLLVLDLALCDVTSGVASESEALLKWKQSLPPQPILDSWVMNQTSPCSWRGITCDLQGSVTTINLAYTELSGTLHNLNFSSFPNLLILDLKTNNLTGTIPQNIGVLSKLQFLDLSTNYLNGTLPLSIANLTQVHELDLSRNDITGILDPLLFPDSSDDPKRGLISIRKLLFQDTHLSGTLPNEIGNIKNLTVLALDANNFYGPIPPSLGNCTHLSVLRLNENQFSGTIPPSIGKLTNLTDVRFFANYLNGTVPRELGNLSSLVVLHLAENNFIGELPPQVCKAGKLVNFSASSNRFTGPIPVSLRNCPSLYRVRIEYNMLTGYADEDFGVYPNLTYIDFSYNRIQGEISSNWAGCENLQVLRMAGNSISGNIPAEIFRLSQLAELDVSSNQLSGEIPLEIGGPTTLYELNFSGNRLSGVIPAKIGNLSSLQSLDLSINMFLGPIPNTIGNLNNLMKLNLSNNNLNGTIPYQIGNLASLQDFLDLSFNSLLGEIPDDLGKLANLIILNLSHNNLSGSIPESISKMLSLSFINFSYNHLKGPVPNARIFNSSSTSDLSNNEDLCGYIKGLRPCEVSIDVPSSASNKHKLKVLVPLLASLGGALFLWLVCFAIFFVINKQNLGSTRRNSWNKRPNPFSIWCFNGRIVYEDIMEATKNFDSEYCIGEGALGKVYKATLKGGQVFAVKKLKCDEENLDIESIKTFKSEVAAMNEIRHRNIVKLYGFCSKGLHRFLIYEYMDRGSLADMLENDERALELEWAKRVDIVKGVARALSYMHHDCNPPLIHRDISSKNVLLSSDLRAHVSDFGTARFLKPDSLIWTPFAGSYGYAAPELAYTMAVTEKCDVFSFGVLTLEILSGRHPGDLVSYIQTTTNQSINFKDILDPRLLPPNHDKHVLKELALIADLSLSCLQTNPQSRPTMRTVAQLLEVDTAHNS* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1220 937 SUPERFAMILY Protein kinase-like (PK-like) 634 930 IPR011009 -
Ahy13g1220 937 Pfam Protein kinase domain 665 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1220 937 Gene3D Ribonuclease Inhibitor 159 248 IPR032675 -
Ahy13g1220 937 Gene3D Ribonuclease Inhibitor 97 157 IPR032675 -
Ahy13g1220 937 SMART LRR_typ_2 264 288 IPR003591 -
Ahy13g1220 937 SMART LRR_typ_2 87 111 IPR003591 -
Ahy13g1220 937 SMART LRR_typ_2 216 240 IPR003591 -
Ahy13g1220 937 SMART LRR_typ_2 384 408 IPR003591 -
Ahy13g1220 937 SMART LRR_typ_2 456 480 IPR003591 -
Ahy13g1220 937 SMART LRR_typ_2 505 529 IPR003591 -
Ahy13g1220 937 SMART LRR_typ_2 135 159 IPR003591 -
Ahy13g1220 937 Pfam Leucine Rich Repeat 507 528 IPR001611 GO:0005515
Ahy13g1220 937 PRINTS Leucine-rich repeat signature 459 472 - -
Ahy13g1220 937 PRINTS Leucine-rich repeat signature 505 518 - -
Ahy13g1220 937 SMART serkin_6 660 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1220 937 ProSiteProfiles Leucine-rich repeat profile. 507 529 IPR001611 GO:0005515
Ahy13g1220 937 Gene3D Ribonuclease Inhibitor 249 579 IPR032675 -
Ahy13g1220 937 ProSiteProfiles Protein kinase domain profile. 660 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g1220 937 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 5 932 - -
Ahy13g1220 937 SUPERFAMILY L domain-like 42 426 - -
Ahy13g1220 937 SUPERFAMILY L domain-like 349 567 - -
Ahy13g1220 937 Gene3D Ribonuclease Inhibitor 18 96 IPR032675 -
Ahy13g1220 937 Gene3D Transferase(Phosphotransferase) domain 1 740 936 - -
Ahy13g1220 937 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 5 932 - -
Ahy13g1220 937 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Ahy13g1220 937 Gene3D Phosphorylase Kinase; domain 1 627 739 - -
Ahy13g1220 937 ProSitePatterns Tyrosine protein kinases specific active-site signature. 785 797 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1220 Ahy-Chr13 14115245 14119775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1220 2 833 Receptor kinase-like Gene Family AT4G08850 39.397 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy13g1220 Pkinase 8.60E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1220 - - adu:107477534 1752.26