LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy13g1217	ATGGCCTGGCCACTAGTCTCTGCCTTCCCTAGGAAGATGCTCAAGAACCTTCAAAATCAAGAAACCATGGAGTTTCTTCATCAGTCTTTGCTGACCATTGCTGCTGTCGCCGACGACGCTCAAGAGAACCTCTTCGCCACAACTTCAGCCTTAAGCAATAACATGGTAGAATGGCTTTGTCACTTCCAAGATATCATGTACCTTTTGGACGAGCTTCTCTGCAAGTTCGATTCTGGAAAAGCAATAACAACAACAGTTGCAGATGCTAAACGTGAATTTGAGTTCGTCCTTCGAAGATTTGAAACCATAACAAACCAGAAGCATCTTCTCTTCCTGACCGAGAAACAAGAACAACTATCTTCTTCTCCTTCTCAGAATCTAAGAAGAGATAAAGAGATGAATGAGATGGTTGACCTTTTACTCTCCGATCGAGAAAATACGCCTGTAATTGCTGTGGTTGGAGCGGCATGGACCGGAAGGGACACTCTTGCTAACCTCGTTTACTACCATGGCAGAGTCAAGGCCTGTTTCGAACTTCGAGGTTGGGTTGACTTTCAATGGGATCTTGATTCCGAGAGTTTAGCTAAGATAACTCTTGATAGTTTCAATCAAGATTTTCACTATGATGAAAGTCTACCAGAACTGATTGATAGACTGCACAAGTGCTTACAGGGGAAGAAGGTTCTTCTTGTTTTGAACGGTTTTCGAAATCTTTCTGGCTGGGAAGCCCTTCGGTCATGTTTTTCTGATGCTGCAGGCAATGGAAGTGCGATAATACTCACTACATCAGAGCTGGACGTTGCGTTCGAGATGCTTTCGGATCATGTTTTGTCATTGGAAGATTCCTTGTTTGATCTTCTTGATGAAAAGAATGATCCACAAGGCTTTCCTATTATGTGGACCGGAAAGTCTCTTTATCATCTAGTTCGCCTCGAAATTGTAGGCTCTTGGATATCATATTTGCCAGATGAGATTGGAGAACTAAGATTTCTTGAATACATTGACCTCTCTTTCTCTGAAATTCGAGCATTGCCGGATTCAATAGGCATGCTATCTCGTTTGGAAACATTGAAGTTGGCTTTCTGCTGCTATCTTCGAGAGCTGCCAAGTACCATGGAAGATTTGGTTAACTTGCGTTATCTTGATCTAATGGGAACCAGGCTGCTAGATATGTCCTTAAAGCTTGCAAGTTTCAACAACCTCCAAACCTTGATTGGCTTCACGGTCAACATGAATTCTGGGGAAAATTTGACAGAGTTGGCAACTATATCGGATATCCAAATGCTAAGCATCACAGAGTTGCAGAACATTGTGGAAGCTAGGAATGCCGCAGAAGCCAAATTGAAAGAAAAGAGGCACTTGGAAGATCTTGTCTTGAGATGGAATCAGCTGCGCTTTGCTGAATGTGAGCAAGCACTAGAATATTTGGAGCCACCAAAACAGCTAAAAGTGTTAGAGATTTCAGGCTGTCCTGATAGAAGATTTCCATACTGGTTAGGAGACGCCTCGTTTGCGAATTTGAGGGTGATTTGTATTTATGACTGTAAGAATTGTGAGTTCTTGCCACCACTTGGACAGCTTTCGTCTCTTGAAGAGCTATATATTCGAGGGTGTGACAATGTAAGATCAGTAGGCAATGAATTCTATGGACAGTGTTCTTTGCATGTTCCATTTAAGTCCTTGAAGATCCTGTGGTTTGTGGACATGCCTAGTTGGAAAGAATGGATTCTCTTAGATGATGAAAGTCTTCAGTTTCCATGTCTCTGCGAGCTTTACTTGATACAATGCCCGCAGTTGCTGCAAGACTTGCCTAAGTGCCTTCCTTCTCTTAAAAAGCTTGAAATATTTCAATGTGATCGCCTCGTGTCTCCACCACCCAAGATACCTCATCAAGTCCATGAATTGATGGAACAAAAAGAGGAACAAGAACAAGGCTGCACTGAGATTCTTGCAACAAGTGTGACTCAAGTGACTTCAGAATCCTCCTCACACCATGCCACAATTATAATGCCTCCTGTCGCAAATGGTAAGAATGATGAATTAGTTTCAGATGATGATGGAGGCATGGTAGATTTTGAGTCTTCTTTTGAAATTGTGAAGATTGCAGATGCATCAGAGCTGTGCAACTTGACATCCAGAATAAAAAGCCTTAGAATTGAAGGTTGCCAGTTCCTTGAGTCCCTACCAGATGAATTTCTAAAAGATTGTTCAAATATCAGAGAGTTATTTTTTATTGATTGTTACTCTCTCAAGAACTTCTCTGATGTTCTGCACCCCAGTTCCCTGAGAACAATTTATATCCACAAATGCCCAAATTTAGATTTCCTCATTCCTCTCGGAACACACAAGAAATTTGCATTCTTGGAATATCTTTGCATAAGTAGTAGCTGCGAATCGCTCGCCTCCATATCCATAAACCTTTTCCCGAGACTCAGAACTCTTTATATCAAGGATTCTCCCAAACTAGAGTCATTTTCAATAGCCAAGGAACTTCGTGATCGAAATCTGAAACTTGAGTCGTTGGAAATCCGGGACTGTCCTAATCTGATATCCTTTCCAGAAACAGGATTGCCAACTCCTTACCTTAAATCAATATCAATATCTAATTGCAGAAGGTTGAAGTCACTGCCCAATCATTTAGCAAATCTTACATCACTTCAATCATTGCTTATAGACAAATGTCCAGAACTTGAATCTTTTCCTGAAGGGGGCTTGCCATCTAGTTTAAGTTTACTTTCTATCACCTTTTCTGACAAACTTGCACCTCAAAAGGAGTGGAAGTTGGATACACTTCCCTCATTAACTCATTTTGAGATTGAAAGTGGATGCATTGGCATGAAGTCATTTCCAAATAAGGACTTTTTGCCAAGAAATCTCAAGTCTTTACGCTTGAGTAAACTTTCGAGTCTCAGAATCTTGAATGGCACAGGGTTTCAGCATTTGACAGCTCTTGAGACATTGGAGATCAACTGTTGTCATGGGCTATATTCCTTGCCAGAAGGGATGCCATCATCCTTGACTCGTCTTTGCATCAAAGAGTCCCCAATATTGTCCCATAAACTCTTGCATAGAGCGGGCGCGGAGTGGAGCAAGATAGCTCATATTCCCAACCTACAGATTGATGAAGTTAAAAAAGAAGGGGAAATCCCTGAACAAAAACAAAAATTCGGGGAAAAGAGATTTGTGACAAGATCAACATATTTGGAGGGAGGAAAAGGCATCTTAGATGGAGAAAGCCTCAAAAGCCAAAAATTGGATCAAAGAAGGAAAAGGATGCCAATGGTGTCAGATGTATCCTATGAATCAGACTGGAGCAAGATAGCTCATACTTCCAATCTTCAAATTGGTGATGGAATCAAAGAAGGATCAATTGAATTGGAAGCCAGCTTAAAGGGTGAAAGTGTGAACAAAGATGAAAAAAGCTTTACCAGCCAGCAATGGGACCTAAGTTTAGTTACAAAGAAAAGGATGCCACCAACATTAAAAGGTTTCTACGACCTTCAACCTGATGATGAAGTAGTTAAAAAAGGTGGAGGAGGCCGAGGCCGCGACCATGACCCTGGCAGATTAGATGACACTTGGACCTCATCAATGGAAGCAGAAGTTCAAACTGTCCATGGAATCTCAAAGAACCCTTTCAGCCACATAACTAGCAAGGGAAAAGATAGAGATTTGGAGGATTTCACCCTGCAAAAGTTGCTTGAATTGACCGAAAACTTCTCAGAGGACAAAATGATTGGGAGAGGAGGCTTTGGATCAGTATACCATGCTACACTGCAAGATGGTAAGGAAGTTGCAATAAAAAGAGCTGAAATCTCTCCCAACTATGAAGATGAGAAGGAGTATGGCTTTGTGAATGAGCTTCAGATTCACTCAAGACTCCACCACAACAACCTGGTTGGGCTATTAGGATTCTGCCGTGACGCGAATGAGCGCATCTTAGTGTATGAGTACATGAACAATGGCAGCCTCCATGATCATCTCCACAGCCACCAAACTTCTTCTGTTCTAATGTCATGGCCGGCACGGATCAAGGTAGCACTGGATGCAGCAAGGGGGATAGAGTACCTCCACCACTATGCTGTCCCACCAATCATTCATCGCGACATAAAGTCATCCAATATATTATTGGATTCCAAGTGGACAGGCAAATTGTGTGATTTTGGAATCTCATTGAAGGGTCCTGAAGATGAGGACACACATCTTTCAGTTGAAATAGCTGGCACACCAGGCTACTTGGACCCTGAATACTATATAACTCAAAGGCTAACCACAAAGAGTGATGTTTATAGTTTCGGGATTGTTTTGCTAGAGATACTAACTGGATGCAAAGTCATACATAAAGATGATAATGGGGAGCACAGACATTTGGCAAGTTTTGCAGTACCATATATTGATCAAGATGAGATTTTCAAGGTTTTGGATCCAAGAATGCCACCCCCAAAAGCTGCTGAGGAGTATGTGGGGTATTTAGCAGCAGAATGTGCACGCGCAGCACCTCGAGACAGACCAACTATGGCTGAAGTTGTAATTCACTTGGAAAGAGCATTGGCTGCTTGTTTGGCCGTACCAGCAATATGA	4581	0.4198	MAWPLVSAFPRKMLKNLQNQETMEFLHQSLLTIAAVADDAQENLFATTSALSNNMVEWLCHFQDIMYLLDELLCKFDSGKAITTTVADAKREFEFVLRRFETITNQKHLLFLTEKQEQLSSSPSQNLRRDKEMNEMVDLLLSDRENTPVIAVVGAAWTGRDTLANLVYYHGRVKACFELRGWVDFQWDLDSESLAKITLDSFNQDFHYDESLPELIDRLHKCLQGKKVLLVLNGFRNLSGWEALRSCFSDAAGNGSAIILTTSELDVAFEMLSDHVLSLEDSLFDLLDEKNDPQGFPIMWTGKSLYHLVRLEIVGSWISYLPDEIGELRFLEYIDLSFSEIRALPDSIGMLSRLETLKLAFCCYLRELPSTMEDLVNLRYLDLMGTRLLDMSLKLASFNNLQTLIGFTVNMNSGENLTELATISDIQMLSITELQNIVEARNAAEAKLKEKRHLEDLVLRWNQLRFAECEQALEYLEPPKQLKVLEISGCPDRRFPYWLGDASFANLRVICIYDCKNCEFLPPLGQLSSLEELYIRGCDNVRSVGNEFYGQCSLHVPFKSLKILWFVDMPSWKEWILLDDESLQFPCLCELYLIQCPQLLQDLPKCLPSLKKLEIFQCDRLVSPPPKIPHQVHELMEQKEEQEQGCTEILATSVTQVTSESSSHHATIIMPPVANGKNDELVSDDDGGMVDFESSFEIVKIADASELCNLTSRIKSLRIEGCQFLESLPDEFLKDCSNIRELFFIDCYSLKNFSDVLHPSSLRTIYIHKCPNLDFLIPLGTHKKFAFLEYLCISSSCESLASISINLFPRLRTLYIKDSPKLESFSIAKELRDRNLKLESLEIRDCPNLISFPETGLPTPYLKSISISNCRRLKSLPNHLANLTSLQSLLIDKCPELESFPEGGLPSSLSLLSITFSDKLAPQKEWKLDTLPSLTHFEIESGCIGMKSFPNKDFLPRNLKSLRLSKLSSLRILNGTGFQHLTALETLEINCCHGLYSLPEGMPSSLTRLCIKESPILSHKLLHRAGAEWSKIAHIPNLQIDEVKKEGEIPEQKQKFGEKRFVTRSTYLEGGKGILDGESLKSQKLDQRRKRMPMVSDVSYESDWSKIAHTSNLQIGDGIKEGSIELEASLKGESVNKDEKSFTSQQWDLSLVTKKRMPPTLKGFYDLQPDDEVVKKGGGGRGRDHDPGRLDDTWTSSMEAEVQTVHGISKNPFSHITSKGKDRDLEDFTLQKLLELTENFSEDKMIGRGGFGSVYHATLQDGKEVAIKRAEISPNYEDEKEYGFVNELQIHSRLHHNNLVGLLGFCRDANERILVYEYMNNGSLHDHLHSHQTSSVLMSWPARIKVALDAARGIEYLHHYAVPPIIHRDIKSSNILLDSKWTGKLCDFGISLKGPEDEDTHLSVEIAGTPGYLDPEYYITQRLTTKSDVYSFGIVLLEILTGCKVIHKDDNGEHRHLASFAVPYIDQDEIFKVLDPRMPPPKAAEEYVGYLAAECARAAPRDRPTMAEVVIHLERALAACLAVPAI*	1527

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy13g1217	1526	Gene3D	Ribonuclease Inhibitor	914	1052	IPR032675	-
	Ahy13g1217	1526	Gene3D	Ribonuclease Inhibitor	760	913	IPR032675	-
	Ahy13g1217	1526	Gene3D	Phosphorylase Kinase; domain 1	1202	1318	-	-
	Ahy13g1217	1526	Coils	Coil	434	457	-	-
	Ahy13g1217	1526	ProSiteProfiles	Protein kinase domain profile.	1240	1515	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy13g1217	1526	CDD	STKc_IRAK	1246	1515	-	-
	Ahy13g1217	1526	Gene3D	Ribonuclease Inhibitor	293	647	IPR032675	-
	Ahy13g1217	1526	SUPERFAMILY	L domain-like	708	1019	-	-
	Ahy13g1217	1526	SUPERFAMILY	L domain-like	264	626	-	-
	Ahy13g1217	1526	PANTHER	SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4	1185	1521	IPR044815	GO:0004674
	Ahy13g1217	1526	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	1365	1377	IPR008271	GO:0004672\|GO:0006468
	Ahy13g1217	1526	ProSitePatterns	Protein kinases ATP-binding region signature.	1246	1268	IPR017441	GO:0005524
	Ahy13g1217	1526	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	123	274	IPR027417	-
	Ahy13g1217	1526	SUPERFAMILY	Protein kinase-like (PK-like)	1223	1514	IPR011009	-
	Ahy13g1217	1526	Pfam	NB-ARC domain	130	273	IPR002182	GO:0043531
	Ahy13g1217	1526	SMART	serkin_6	1240	1517	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy13g1217	1526	Gene3D	Transferase(Phosphotransferase) domain 1	1319	1520	-	-
	Ahy13g1217	1526	Pfam	Protein kinase domain	1241	1512	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy13g1217	1526	Gene3D	-	106	276	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy13g1217	Ahy-Chr13	14038843	14044784	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy13g1217	1181	1524	Receptor kinase-like Gene Family	AT5G47850	51.934	4.27e-102	343

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CR4L	Ahy13g1217		Pkinase	6.40E-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy13g1217	-		-	aip:107629709	2534.98