Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1147 ATGGTTGATTGGACTGGTTCATTAGTCTCTGCCGTTCTGCAAGTGCTGTTCGACAGGATAGCACGTCGTGAGCTCATAGACTTCTTCCGTGTCAACCATCTTAATCAGTCACTTCTTGAGAAGCTCAAGATGCTGTTGCTATCTGTCACTGCGGTCCTCGACGATGCCGAGGAGAAACAGCTTACTGATCAATTGGTGAAGGAATGGGTTGATAGGCTCAAAAATGCTGTCTTTGATGCTGATGATCTCTTGGACGAGATTGCCACTAAATCCTTGCAAGAAATTATGGAACCTGGATCTCGTACCACCTTGGATCAGGTTAGAGACTATGCCTCTTCTCTCAATCCTTTTGCTGAAAGAGTTAAGTCAAAAGTTGAGAGGATTGTTGAGAGGTTGAAGTCTATAATAGAGCATAAAGATCTTCTTGGTCTTAAGGAAGGTGGTGTTGGTGTTAATAAAAACAAACCACTTTCATTAGCTTTACCCACAACTTCGTTGGTGGATGAACAAAGAGTGTATGGCAGAAATGATGAGAAGGAGAAGATTATTGATTCTCTGCTTTCAGGGGAGTTGTTGCATGGTGGAATAGAAGGGGTTCCTGTAGTGGCAATTGTGGGAATGGCAGGAGTAGGTAAGACTACTCTTGCTCAGATTCTGTACAATGACATAAGGGTGAGGAACCATTTTCATTTAAGATCATGGGCCTCTATTTCAGAGGCATCTGGTGTGTATGAAATAACCAAGAAGATTTTCGAGTCCTGTGCTCCCAAATATTCCAACATCATAGACTTGAATGTGCTGCAAGTCAAGCTTCAGGATATATTGGCAAGACACAGGTTTCTGCTTGTTTTGGATGGCTTTTCGAGCATAAACTCTCTCGAGTGGGACATGCTCCGAAGGCCATTTCAATCTGGGAAAAGCTGGGAAAGTAGAATTATTGTCACCACGCATAGTCAAAGTGTTGCAATGGCAATTCAAGCCTTCTTAACTCATTCCCTCTCCCCTCTTTCTCATGAGGATACTTGGAAGTTATTCTCAGGTTGTTCCTTCAAACATGGGAACCCGGATGAGTATCCTATCCTAACAAGAATTGGCAAGGAAATTGTGAGAAAATGCAATGGTCTCCCTCTGGCTGCAAAAGTACTAGGAAGTCTTGTACGTTCCAAAGAGGATGTTGAAGAATGGGAAAGTGTATCCCAGAGTCACATATGGGAGTTACCAAGTGGTAGGAGCAGCATTCTTCCTGCTTTGATATTAAGCTATTGCCATTTGCCTCCGCTGTTAAAGCGATGCTTTGCTTATTGTTCCGTGTTTCCTAAAGGCCATGAAATCAAAAAGTGGGACTTGATCTATCTATGGATGGCTGAAGGTATTCTGCCACAACCAGACACAGAGAAGAGAATGGAAGATATAGGAGTTGAGTGCTTTCAAGAGTTGCATTTTAGGTCATTTTTTCATGAGTCAACTCTTGACAAATCACACTTTATGATGCATGATCTTATCAGCGACTTAGCTCAGTTTGTTGCAGGCGATTTTTGTTACATGCTAGGAGATAACAATACAAGAAAGATTAAGAACTGGGCTCGCCATTTATCCTTTTCGCAGGACAAATATGAAGCTCTTGACAACTTGGATTCCTTCACAGAATGCCAACAACTGAGAACCTTCCTCCCATTTAGATCCTCAAAATCTGGAAGCAAATATGCATTTACTAGAATGGTTCAAGATCTCTTGGAAAAACAAAATCCCCTGCGTGTGCTCTCTCTGTCCTATTATGAAATTACCAAGTTTCCTGTTTCAATTGGGAACTCATTACATCTAAGGTACCTGAATCTTGCTAACACCACAATTGAGTGTTTGCCTCCTGATGTCTGTAGCTGGTATAACTTGGAAACACTTATTTTATCAGGATGTCGCCGTCTCAGTAAGTTACCAGAAAACATGTTCAAACTCATCAATCTGCGCCATCTTGATATTAGTGGAAGCAAAGTTATGGAGATGCCGGCAGAGTTTGGTAGACTGAATTCCCTTCAAGTGTTGACTGATTTCATTGTAAGCAATGGAAGGGGGTCCAAAATTAGTGAGCTTGGGAGCCTTTTAGAGCTTCGTGGAGCGCTTTCGATAGGGAACCTGCAGAATGTGGCTGATGCAATAGAAGCTTCCAATGCAAGGTTGAGGAGCAAGAAATACCTTCATGAGTTAGAATTCAAATGGACAACTACAGCTCATAATGTGAACAGTGAAACTGCAGTACTCAATATGTTGGTGCCACATCAAAATGTGAAGAGGCTAAAAATTCAAAATTTTGGAGGTAGCATGTTGCCAAATTGGTTGGGGAGCTCTGCATTTTCTAGGATGGTGGTTCTGCAGCTTGTGGATTGTAAAACATGCTTGTCACTGCCATCACTTGGACAATTACCCTCCCTTGAGAAACTCTCTATAGCAAAAATGAGAGGTCTGCAGAGGATAGGTCCAGAGTTTTATGGCTATGTAACTGAGCCATTCAAAACCTTGAAGATATTAAAGTTTGAAGACATGCCTAACTGGGAAGAGTGGTCATCCAGCAAACCCGGACAAGCTGCGAGATTCCCTTCACTCGAAGAGCTACACATAACTAGATGTCCAAAATTTACTGGAAAGTTACCTGATCAACTTCCTTCCCTGGTTAAATTAGTGATCACTACATGCCAATCTTGGAATGGCAGGTGCATTAGATTCTCTAGTATGGTAGTCTTACAGCTTGTGGATTGTGAAAGTTGTCTGTCCCTACCATCACTTGGACAACTTCCTTCTCTTGAGAAACTCTATGTATCAAAGATGAGAGGACTACATAAGTTGGGCCTAGAATTCTATGGAAGCATAACTGAGTCATTCAAATCCTTGAAGATCATGAAGTTTGAGGACATGCCCAACTGGGAAGAGTGGTCGACTGGCGGAGCTGAACAAGAATCAAGATTCCCTTCACTTGAAGAACTTGAGATAAGCAGATGTCCTAAACTGATTGGAAAGTTGCCTCGTCGACTTCCTTCGCTACGAAAATTAGTGATCACAGCATGCCAAGCTCTTACAAGCTCAATGCCGTGGGTGCCGAAATTAACAATACTCGAGCTAACTGGTTGCGATGCATTGGAATCATTATCGGAGAGAATGATGGAGGAAAATGAATGTCTTGAAACCATAATCATAAGAAATTGCTCATCTCTAACCACTGTCTTTAGGGAGGGCCTCCTACCAAGTAGTCTAAGATCACTTGAGATCTATGAGTGCAGGAATTTAGAACTATTTGTTTCTCCAAGTTCAACACACGAGTCTCACCAGTATCCTGCTCTTAAACGATTACACTTAAGATTTTGCTGTAGTTCTCTCATATCCTTTCCAATGTCTCTCTTCACCAACCTTGAAGAACTTCAGGTACAAGGCTGTAGCAACCTCAAGAAGATTTCATCTCCTCCAAATTGCCTCCCATATCTTCGGAAGTTGGAACTGAAAGACTGCTCCAAACTGGTTTTGTTTCCAGAAGGAGGGTTGCCTGCTCCAAAACTCGAGTCACTTTCTATTCGCAGCTGTACTGAGCTCTCACCTGACACTGCTTGGGGTCTACATGCAATGACATCACTAACTTCTCTTTATATAAGTGGAATTCCAAGTCTTACTTCTCTAGAGAACACTGGAATTCAGTTCCTAGCATCTCTTAGAACTCTGGAGATTGAAGCTTGTGATAAGCTTGCATTTCTGCCTTTAGATAGACTAGTCCACTCCCTTTCTCATCTTACCATTAGAGGATGCTCATTGTTAAAAGACAAGTGTGAAAGGGATGGAGGGGAATACAGAAGCTTGGTGTCTCTCGTTCCCTACAGAGTCATTGAAGACTAA 3873 0.4214 MVDWTGSLVSAVLQVLFDRIARRELIDFFRVNHLNQSLLEKLKMLLLSVTAVLDDAEEKQLTDQLVKEWVDRLKNAVFDADDLLDEIATKSLQEIMEPGSRTTLDQVRDYASSLNPFAERVKSKVERIVERLKSIIEHKDLLGLKEGGVGVNKNKPLSLALPTTSLVDEQRVYGRNDEKEKIIDSLLSGELLHGGIEGVPVVAIVGMAGVGKTTLAQILYNDIRVRNHFHLRSWASISEASGVYEITKKIFESCAPKYSNIIDLNVLQVKLQDILARHRFLLVLDGFSSINSLEWDMLRRPFQSGKSWESRIIVTTHSQSVAMAIQAFLTHSLSPLSHEDTWKLFSGCSFKHGNPDEYPILTRIGKEIVRKCNGLPLAAKVLGSLVRSKEDVEEWESVSQSHIWELPSGRSSILPALILSYCHLPPLLKRCFAYCSVFPKGHEIKKWDLIYLWMAEGILPQPDTEKRMEDIGVECFQELHFRSFFHESTLDKSHFMMHDLISDLAQFVAGDFCYMLGDNNTRKIKNWARHLSFSQDKYEALDNLDSFTECQQLRTFLPFRSSKSGSKYAFTRMVQDLLEKQNPLRVLSLSYYEITKFPVSIGNSLHLRYLNLANTTIECLPPDVCSWYNLETLILSGCRRLSKLPENMFKLINLRHLDISGSKVMEMPAEFGRLNSLQVLTDFIVSNGRGSKISELGSLLELRGALSIGNLQNVADAIEASNARLRSKKYLHELEFKWTTTAHNVNSETAVLNMLVPHQNVKRLKIQNFGGSMLPNWLGSSAFSRMVVLQLVDCKTCLSLPSLGQLPSLEKLSIAKMRGLQRIGPEFYGYVTEPFKTLKILKFEDMPNWEEWSSSKPGQAARFPSLEELHITRCPKFTGKLPDQLPSLVKLVITTCQSWNGRCIRFSSMVVLQLVDCESCLSLPSLGQLPSLEKLYVSKMRGLHKLGLEFYGSITESFKSLKIMKFEDMPNWEEWSTGGAEQESRFPSLEELEISRCPKLIGKLPRRLPSLRKLVITACQALTSSMPWVPKLTILELTGCDALESLSERMMEENECLETIIIRNCSSLTTVFREGLLPSSLRSLEIYECRNLELFVSPSSTHESHQYPALKRLHLRFCCSSLISFPMSLFTNLEELQVQGCSNLKKISSPPNCLPYLRKLELKDCSKLVLFPEGGLPAPKLESLSIRSCTELSPDTAWGLHAMTSLTSLYISGIPSLTSLENTGIQFLASLRTLEIEACDKLAFLPLDRLVHSLSHLTIRGCSLLKDKCERDGGEYRSLVSLVPYRVIED* 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1147 1290 PANTHER - 47 898 - -
Ahy13g1147 1290 Gene3D - 420 507 IPR036388 -
Ahy13g1147 1290 Gene3D - 30 136 - -
Ahy13g1147 1290 PRINTS Disease resistance protein signature 201 216 - -
Ahy13g1147 1290 PRINTS Disease resistance protein signature 984 1000 - -
Ahy13g1147 1290 PRINTS Disease resistance protein signature 372 386 - -
Ahy13g1147 1290 PRINTS Disease resistance protein signature 274 288 - -
Ahy13g1147 1290 PANTHER - 907 1075 - -
Ahy13g1147 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 435 IPR027417 -
Ahy13g1147 1290 PANTHER DISEASE RESISTANCE PROTEIN RP 47 898 IPR044974 GO:0006952
Ahy13g1147 1290 Gene3D - 335 419 IPR042197 -
Ahy13g1147 1290 SUPERFAMILY L domain-like 497 895 - -
Ahy13g1147 1290 PANTHER DISEASE RESISTANCE PROTEIN RP 907 1075 IPR044974 GO:0006952
Ahy13g1147 1290 Coils Coil 39 59 - -
Ahy13g1147 1290 CDD AAA 173 305 - -
Ahy13g1147 1290 SUPERFAMILY RNI-like 859 1267 - -
Ahy13g1147 1290 Gene3D - 155 328 IPR027417 -
Ahy13g1147 1290 Gene3D Ribonuclease Inhibitor 514 688 IPR032675 -
Ahy13g1147 1290 SMART LRR_CC_2 986 1025 IPR006553 -
Ahy13g1147 1290 SMART LRR_CC_2 1251 1285 IPR006553 -
Ahy13g1147 1290 SMART LRR_CC_2 1178 1209 IPR006553 -
Ahy13g1147 1290 SMART LRR_CC_2 863 894 IPR006553 -
Ahy13g1147 1290 Pfam Rx N-terminal domain 8 95 IPR041118 -
Ahy13g1147 1290 Gene3D Ribonuclease Inhibitor 1096 1194 IPR032675 -
Ahy13g1147 1290 Gene3D Ribonuclease Inhibitor 1195 1271 IPR032675 -
Ahy13g1147 1290 Gene3D Ribonuclease Inhibitor 707 897 IPR032675 -
Ahy13g1147 1290 Gene3D Ribonuclease Inhibitor 898 1012 IPR032675 -
Ahy13g1147 1290 Pfam NB-ARC domain 191 400 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1147 Ahy-Chr13 12986495 12990367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1147 202 675 WRKY Transcription Factor Family AT5G45050 21.667 1.77e-09 60.5