Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1135 ATGGACTCAGGTTCACCATACCAATGGATAAGGGAGCTGAGATTGGAAGACAGCAACACCTTAAATCCATTTGATCTTCTTTACGAATGTGCCAAATTTGTTGCATCAGGAAGCATAAAAAATGCAGACATAGCACTTGAATACATCTCTCACCAGTTGTCTCCGGACGGCGCAGCAGCGCAGCGAACGGTGACTTATTTCAGCGAAGCTCTGGCTTCCAAGATAGTCAAGAATCTTCCAGGAGTAGACAAAGCTCTAAACTCCTCAAAGAGATTAACTGCTCCTGAAGAAATCCTTGTCCAGAACTACTTCTATGAGTTGTTTCCATTTCTGAAATGTGCTTACTTGACTGCAAATCAAGTCATAGTTAAAGCGATGGAAGGCGAAAAAATTGTTCATATAATTGATCTGCATTGTGCAGAGCCGGTTCAATGGATTAACCTCTTGATGACATTGAATGAGCGTCCTGAAGGACCTCCTCATTTGAGAATCACAAGCATTCATGATAAGAAAGAGGTTTTAGATCAGATGAATGCTAGTTTGACAAGAGAAGCAGAGAAATTGGATTTTCCTTTGCAGTTCAATCCTATAGTTAGCACTTTAGAAGATCTTGACATTGATAGTTTGCCGGTTCGCACAGGCGAGGCGCTTGCAATTTGTTCTGTCTTGCAGCTGCATCGCCTTCTAGCCACAGATGATGAACTTCTAGGGAGGAATTCCCCGGCTGCAACGATTAATCTGCATAGAGCAGTGCATATGAACCGAAGAACTTTCGCAGAGTGGCTCGAAAGAGATATGATGAATTCATATATTTCAAGTCCTAACTCTGCTTTGTCACCTCCTCCTCTGTATCCTTCACCTAAGATGGAGGCATTTTTAAGAGATCTTCGCAAACTGCAGCCGAAATTAATGGTGATAACTGAGCAAGAGACTAATCTTAATGGATGCAGTCTTGTGGAGAGAGTTGAGAAAGCTTTGTACTTCTACAGTGCTTTGTTTGATTGCTTGGATTCGACCGTGCGAAGAACTTCCTTGGAGAGGAAGAAAGTTGAGAGTTTGCTGCTTGGAGAGCAGATAAAGAACATCATTGCATCTGAGGGGTTTGAGAGAAAGGAGAGGTATGAGAAGCTTGAGAATTGGATTCGGCGGCTCGATCTGGCCGGTTTTGTGAGGCTGCCTTTGAGAGACAATGATAAGTTGCATGCTAAGGAGGTTTTGCACAACTATGGACACAAATATATGATTAGAGAAGGCCATGGTTGCTTGCTTGTTTGTTGGGGTGATAGACCCCTTTTCTCCATTTCAGCATGGAGTTTTAGAGGATTAAATCTTTCTTTATAA 1341 0.4243 MDSGSPYQWIRELRLEDSNTLNPFDLLYECAKFVASGSIKNADIALEYISHQLSPDGAAAQRTVTYFSEALASKIVKNLPGVDKALNSSKRLTAPEEILVQNYFYELFPFLKCAYLTANQVIVKAMEGEKIVHIIDLHCAEPVQWINLLMTLNERPEGPPHLRITSIHDKKEVLDQMNASLTREAEKLDFPLQFNPIVSTLEDLDIDSLPVRTGEALAICSVLQLHRLLATDDELLGRNSPAATINLHRAVHMNRRTFAEWLERDMMNSYISSPNSALSPPPLYPSPKMEAFLRDLRKLQPKLMVITEQETNLNGCSLVERVEKALYFYSALFDCLDSTVRRTSLERKKVESLLLGEQIKNIIASEGFERKERYEKLENWIRRLDLAGFVRLPLRDNDKLHAKEVLHNYGHKYMIREGHGCLLVCWGDRPLFSISAWSFRGLNLSL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1135 446 ProSiteProfiles GRAS family profile. 14 438 IPR005202 -
Ahy13g1135 446 Pfam GRAS domain family 25 437 IPR005202 -
Ahy13g1135 446 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 440 - -
Ahy13g1135 446 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 440 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1135 Ahy-Chr13 12778428 12780401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1135 1 440 GRAS Transcription Factor Family AT1G50420 49.778 3.37e-148 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy13g1135 GRAS 7.20E-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1135 - - gmx:100779726 588.956