Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1112 ATGGCTCCTTCTTCTTCTCCGATTGTTACTGATTCACTGGATCCATCAACACCTACCGAAACTCTTGACAACGATCTTCAGCCATTCTTTGTTCTTCACAAACCTTCATCCCGAAGAAAAGATAGATCATCAACAGGACAAGGTAAACTGCGAAAAAGAAATGAGCTGTCTTCACCGCAGAACACAAAGAAACAGGAAGGAAGTGTGAACGAAGAATGTGACCACCATTTGTTTAAGCCGCTACAAATTGAAGCATTTAACAGTGTTTGGTCAAGAATCGAGTCCACCATTAAGGATGTTTTGAGAGATCTCAATTCTAGTGCATTTAAAGATATACAACTATGGATTCTGGAGTGCTTCAATGCTGCTAGATTGCATGGAGAACCTAATATCACAGAAGCAACTCGATCCTTTCCTATTCTGAGTAATGCTACTCCTGGTCAACTGTCCACTGCATTGGTTATTACCAGAAATATAGAATTTGTTGATGATATATTGACCTTTGAAGAGCTCGGTCATTTCTTGAAATCCCATGGATGCCATGTAGCCAAGCTTTCTTCAGTGGATTTTTCAATGAAAAACGGAATTGCTGGTTGCTTAAAAGCTTTATTGCGAGAGTTTCCACTGGGTGAAATTGATTCAGCTGATATTTCAATCTTAGCATCATGGTATAGAGAACAAGACAACAACAATAAACCACTAGTGCTTATCATTAGTGATTTGGAAAGGTGTTGCGGATCTGTCTTAACGGAATTTGTCCTGATGTTGAGCGAATGGGTTGTCAAGTTACCAGTCATCTTAATAATTGGAGTTGCAACGACAGTAGATGCCCTAAGAAATGCTCTGCCATCTCGTGCTCTCCAATGCTTATGTTCCTCCAAGTTTATGATTGGAACACCAGATGAGAGAATGGATACAATTGTTGAGGCTGTTCTTGTGAAACATAGCACTACATTTAATATTGGTCATAAAGTGGCACTCTTTCTAAGAAATTACTTCATTAACCAAGATGGGACATTAACATCTTTTATAAGAGCTTTGAAGTTAGCATGTTTGTTACATTTCTCCATGGAACCGGTCTCTCTCATACATGGGCTTATGCTGGCAGAAGACCAAAAGGATTGGATATCTGCATTGTCACCTGAGATTTTGTTGAAATACATGGATGAATTTCCATCATATGATAGGAGTCAAATTGCTAATCAAGCTGGAAAGAGCATTGCCCAGGGTTTGTCAGATTTGATGACAGAGAAAAGGCTATGGAGCACCGCAGTTCTTTGCCTATGTGAAGCTGGAAAATACAGCAAAGTGCGACTGCTGGACTTGTTTTGCGAAGTGCTCAATCCAGATTTGTACCCGCATAGAGATTCCGTTTGTCACATCAGGAATGAAAAAGATCAAGGGTTGTCTTCAACAAATGGCCACAGTCAACAATACTCTTCCGTTCAAACCGGTGGTTTGATTCGCCAAATAGTTCGCAAAGTGAGGGATCTCCCTACAGGAGCGCTTGGTCAACTGATAAAGAGTTGGGAAAAACTTACCGCAGATATTTCCGAGATTCATGATAAATTGAAAACGTTTCAATCTTCAGTAAGATGTGAAGATAGAAGGAGTCCACGCAAGAGTTCCAAGGACATATCCAAGAGATATGGATCGAAAGCTTCATTAGACACTGACAATGAGTCGACAATGTTAAACTTGCAAGCTGTTGCATTTATAGATTGCTTAGTTAGAAATTATATGAGGCCAATCGAATGCATGCCTTTTCATGAAATTTCCTGCTTCAAGAATGTTGAGAAACTTCAAGTGGTTTTGATTGGAGATCCAAGAAGAAGAATTCAAGCTGATCTGTTGGATTCACATAAGATTTTAAGTTGCGGTTGCTGTAACAAAACTGGCAATGCCCTATTGCCATCAAGACAGGATTCCTCAATTCTGTATTCCCTGGCTCAAGAGCACGGAGATCTTATCAATCTTCACGATTGGTTCCAGTCTTTTAGAACAATTCTTCACCAAACAAATAAACGGAAACCAAAGTCAAAGCAGTCACCCCAGCCAAAGAAGAGAAAAGATACAGCTGGATCTGGAGACCAAAATGAAGCATCAATCCAAGCACGCTTTTGCAGAGCAGTTACAGAAATGCAGATTACCGGGCTGCTTAGAATGCCAAGCAAGCGCCGCCCAGATTTTGTACAAAGAGTAGCATTTGGACTTTGA 2217 0.4028 MAPSSSPIVTDSLDPSTPTETLDNDLQPFFVLHKPSSRRKDRSSTGQGKLRKRNELSSPQNTKKQEGSVNEECDHHLFKPLQIEAFNSVWSRIESTIKDVLRDLNSSAFKDIQLWILECFNAARLHGEPNITEATRSFPILSNATPGQLSTALVITRNIEFVDDILTFEELGHFLKSHGCHVAKLSSVDFSMKNGIAGCLKALLREFPLGEIDSADISILASWYREQDNNNKPLVLIISDLERCCGSVLTEFVLMLSEWVVKLPVILIIGVATTVDALRNALPSRALQCLCSSKFMIGTPDERMDTIVEAVLVKHSTTFNIGHKVALFLRNYFINQDGTLTSFIRALKLACLLHFSMEPVSLIHGLMLAEDQKDWISALSPEILLKYMDEFPSYDRSQIANQAGKSIAQGLSDLMTEKRLWSTAVLCLCEAGKYSKVRLLDLFCEVLNPDLYPHRDSVCHIRNEKDQGLSSTNGHSQQYSSVQTGGLIRQIVRKVRDLPTGALGQLIKSWEKLTADISEIHDKLKTFQSSVRCEDRRSPRKSSKDISKRYGSKASLDTDNESTMLNLQAVAFIDCLVRNYMRPIECMPFHEISCFKNVEKLQVVLIGDPRRRIQADLLDSHKILSCGCCNKTGNALLPSRQDSSILYSLAQEHGDLINLHDWFQSFRTILHQTNKRKPKSKQSPQPKKRKDTAGSGDQNEASIQARFCRAVTEMQITGLLRMPSKRRPDFVQRVAFGL* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1112 738 MobiDBLite consensus disorder prediction 535 555 - -
Ahy13g1112 738 MobiDBLite consensus disorder prediction 1 24 - -
Ahy13g1112 738 MobiDBLite consensus disorder prediction 673 700 - -
Ahy13g1112 738 MobiDBLite consensus disorder prediction 34 49 - -
Ahy13g1112 738 MobiDBLite consensus disorder prediction 50 66 - -
Ahy13g1112 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 229 362 IPR045667 -
Ahy13g1112 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 65 205 IPR045667 -
Ahy13g1112 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 18 737 IPR020795 GO:0003677|GO:0005664|GO:0006260
Ahy13g1112 738 MobiDBLite consensus disorder prediction 1 71 - -
Ahy13g1112 738 Pfam Origin recognition complex winged helix C-terminal 610 736 IPR040855 -
Ahy13g1112 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 18 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1112 Ahy-Chr13 12541648 12550448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1112 1 670 Core DNA Replication Machinery Family AT5G16690 45.962 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1112 K02605 - gmx:100780646 1060.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1112 13 12541648 12550448 Ahy13g1112 13 12541648 12550448 ECH