Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1110 ATGGCAGATACTGTGATTTCCTTTGTCCTTGATAACTTGTCCCAATTGCTAGCACGCGAAGCCAGTCTGCTCTGTGGTGTGGATGACAGGGTTAAATCCCTTCAAAGTGTGCTCAACATGATGAACGAGCATCTCCAAACCTCTGAAGGAAAAACCAAGAAAGGAATAGAGAAAGAAGTTCTTCGCCAGATCAGAGATGTTGCACATGAAGCTGAGGATGTCATCGACACCTTTGTTGTCAACGTGGCTATACACAAGCGTAGAACCAAGCTGGGGAAGATGCTCCATGGTCTTGAGCATGCAAAGTTGCTCCATGATGTGGCTGAGAAAATAGACAGCATCAAAGCCACTGTCAATGATATAAGAGATAACAAGATCAAGCTCACCGATGTCGTCCCACAAGAAAGTGGATCATCGACGTCAACAAGAGAAGAGGAGGAGAGGGTTCTGTTGATGCACAAGAAGAGAAGAATTGTGGAAGAACATGATGTAGTTGGTTTTGTTCGTGAATCCAAGGCAGTCATCCAGCGGCTTAAGGAAGAGAGTTCCCAAAGCAATGTTGTCTCCATCATCGGTATGGGTGGCTTGGGCAAAACCACCCTTGCCCGGAAGGTCTATAACAGCGGTGAGTTGAAGCCATATTTCAAATGTCGTACATGGGTTTATGTGTCAAATGACTGCAGAGTTAAGGACCTCTTGATTAGCCTTATCAAGTCTTTGATGCCTAACCTTGAACACGAGCATGGGAGGAAAAAGAAGGGAAAGAAACAAAAGGGAACAGAGAAACCAGGTGATCTCTCTAGCTTGGATGTGGATAAGCTAAAGCTCATGGTGCGAGATTTCTTGACCATGAAAAGGTATCTGATAGTCCTTGATGACCTCTGGAAGACTCAAGATTGGGATGAGATACAAGATGCTTTTCCAAACGACAATAATGGTAGTAAAATATTAATTACTAGCCGTTTGAAAGAGGTGGCATCCCATACAAGTCCATATCCTCCTTATTACCTTCAATTCCTCAGCGATGATGAAAGTTGGGAACTCTTTTCCAGGAGAGTGTTTCGAGGAGAAGAGTGTCCTTCTGATATAGAGGATCTTGGAAAACAAATGGTTAAAAGTTGTGGCGGTTTGCCACTCTCCATTGTTGTTTTGGCAGGGTTACTTGCAAACAAGAGGAAGTCACACGAGGAATGGTCCAAAGTTGAGGGACATGTCAACTGGTTTCTTACTCAAGAAGATAAGACCCAAGTCAAGGACATACTCAAACTCAGCTACGACAACTTGCCTACAAAACTAAAGCCGTGCTTTCTGTATTTCGGGATCTACCCTGAAGATTTTGAGATACCTGTAAGGTCATTGCTGCAAAAATGGGTGGCTGAGGGATTTATTCGACAAACTGGGACCAGAAATGCAGAGGATGTTGCTGAAGATTACTTGTATGAGCTCATTGATCGTAGCTTGGTTCAAGCATCGCGAGTGAATGTTAATGGAGATGTGAAGGCATGTCGCGTCCATGATCTTCTTCGAGATCTTTGCATATCTGAGAGCAAAGAGGACAAGCTTTTTGAGGTTTGCACAAATAATAACATTTTGGAGAGATCAAAACCTCGCAGGCTTTCTATCCAATGTGGCATGCATCGCTATGTTTCTTCAAGCGACAATGACCATTCATGTGTCCGATCTTTGTTTTGCCTTGACCCAACAAGTGGATTATGGAACATGAAACAACTTAGGCATTTGAATACTAATGGAAGCATCATCCTACATGGCCACCATCGTTCAAAAGCAGGTGATCAAGTTATGTGGAATCTTGAAAGCATGTACTACATTAAATTCAATAGACAGATTGCACACATGTTAGAGAAAGGAAGCTTTCCCAAGCTACGAAAGTTGGGTCTGCACATATCCTCAGTCCAGAAAAATAATGTGCATGAGTTGTTGTCAAGCCTACAACGTTTAATTCATCTAAACAAGTTACAAATTTCCATTAAATGGAAGAAAACACGGCGCGGAATGCCCTTAAACTACAAGCAGCACATGGAATGGCACGTCGGGGTCAAGCCAATTGAATTGTTACAGAGCCTGCAGCAGTTGTCAAATCTGAGCACATTAAAAGTTCTCAGAGCTTTCGACATTGCAACGTGTGATATTGCATTTCCTCCATTCATTACAAAATTAACGTTGACAGGCATTAGCTTCATGAATGATGATGGGATGAATGCCATTGGTAATCTTACTAGACTTAGACGTTTGAGATTGTATGGAACACTTGCATTTGATATTCTCTTTGATATTAATTGCACTGCAAACAGTTTCCCACAGCTCCATGTTTTTGAGATGGAGTGGCTGAATGTTGATAACTGGAAATTAGGCAATGGTGCAATGCCATGCCTTCAAACTCTGCTTATCAATGTCTGTAAAAGATTGGACGATCTCCCAGATGAACTGTGGTCTTTGACTTCCCTGAGACAAGTAAAAGTTCTGACACCCTCCCCAGCATTGTGTCTTGCACTAGAAAAGTTGGAAATGAAGAATGGATGTGAGCTCGTAATCGAATAG 2559 0.4244 MADTVISFVLDNLSQLLAREASLLCGVDDRVKSLQSVLNMMNEHLQTSEGKTKKGIEKEVLRQIRDVAHEAEDVIDTFVVNVAIHKRRTKLGKMLHGLEHAKLLHDVAEKIDSIKATVNDIRDNKIKLTDVVPQESGSSTSTREEEERVLLMHKKRRIVEEHDVVGFVRESKAVIQRLKEESSQSNVVSIIGMGGLGKTTLARKVYNSGELKPYFKCRTWVYVSNDCRVKDLLISLIKSLMPNLEHEHGRKKKGKKQKGTEKPGDLSSLDVDKLKLMVRDFLTMKRYLIVLDDLWKTQDWDEIQDAFPNDNNGSKILITSRLKEVASHTSPYPPYYLQFLSDDESWELFSRRVFRGEECPSDIEDLGKQMVKSCGGLPLSIVVLAGLLANKRKSHEEWSKVEGHVNWFLTQEDKTQVKDILKLSYDNLPTKLKPCFLYFGIYPEDFEIPVRSLLQKWVAEGFIRQTGTRNAEDVAEDYLYELIDRSLVQASRVNVNGDVKACRVHDLLRDLCISESKEDKLFEVCTNNNILERSKPRRLSIQCGMHRYVSSSDNDHSCVRSLFCLDPTSGLWNMKQLRHLNTNGSIILHGHHRSKAGDQVMWNLESMYYIKFNRQIAHMLEKGSFPKLRKLGLHISSVQKNNVHELLSSLQRLIHLNKLQISIKWKKTRRGMPLNYKQHMEWHVGVKPIELLQSLQQLSNLSTLKVLRAFDIATCDIAFPPFITKLTLTGISFMNDDGMNAIGNLTRLRRLRLYGTLAFDILFDINCTANSFPQLHVFEMEWLNVDNWKLGNGAMPCLQTLLINVCKRLDDLPDELWSLTSLRQVKVLTPSPALCLALEKLEMKNGCELVIE* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1110 852 PANTHER - 44 850 - -
Ahy13g1110 852 Gene3D - 430 514 IPR036388 -
Ahy13g1110 852 PANTHER DISEASE RESISTANCE PROTEIN RP 44 850 IPR044974 GO:0006952
Ahy13g1110 852 Pfam Rx N-terminal domain 5 90 IPR041118 -
Ahy13g1110 852 Gene3D - 5 108 - -
Ahy13g1110 852 Pfam NB-ARC domain 172 427 IPR002182 GO:0043531
Ahy13g1110 852 Gene3D Ribonuclease Inhibitor 525 830 IPR032675 -
Ahy13g1110 852 Gene3D - 339 429 IPR042197 -
Ahy13g1110 852 Gene3D - 145 331 IPR027417 -
Ahy13g1110 852 SUPERFAMILY L domain-like 495 824 - -
Ahy13g1110 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 439 IPR027417 -
Ahy13g1110 852 CDD RX-CC_like 2 123 IPR038005 -
Ahy13g1110 852 PRINTS Disease resistance protein signature 702 718 - -
Ahy13g1110 852 PRINTS Disease resistance protein signature 374 388 - -
Ahy13g1110 852 PRINTS Disease resistance protein signature 187 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1110 Ahy-Chr13 12527249 12530513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1110 188 532 WRKY Transcription Factor Family AT5G45050 26.050 2.25e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1110 - - adu:107477359 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1110 13 12527249 12530513 Ahy13g1110 13 12527249 12530513 ECH