Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1109 ATGATCCAGAACGCTGATATGAAACTCGAGTCAGGGACTTGTAACGTTTGCTCAGCTCCTTGTTCGTCCTGCATTCATCTTAGTCGAGCTCTCACTCGACCAAAGGCCAAAGAGTTCTCTGATGAAAATTGTCACTTGGGGGAGGCCAATCTGTTTTCTACGGATGAGGGTGATCAATCTTCTCGTAGGAGCAGAACTTGTGAAAGATTGAATCATGCTAGCAGTGAAACCGGTAACATGCTTGGTGTTAATTCCTGTCATGAATCTATGTCTGAAAATGCTGAAAGCACACGAGCTTTATCAGAGAAGTACCGGGATGCCAAATTTTTAGAAGGTCTTGATGACAATGCTTCTTGTATCAGTAGAACCAGTGATGCTGATTTAATACCTGTTATTAATGGCAATACTGCTGTGCTTTCGACAAGAGTATATCCAAAGTCAGAATCAGATTCAGATAGTGATGTTGGTAATGTGAAAGACAAAAATCATAAAGTTCCAGTCCGTGATGGACTGCATGAGAAGCAAGGGGAGCAGGTTAAATCACCAGTCAAGCCTGAAGCTCACTCTGAAGATGAGAGTGATGACTCAGATGTTGAGCATGATGTAAAAGTTTGTGACATCTGTGGGGATGCTGGTCGGGAGGAGCTACTTGCAGTATGTAGCAGGTGCAGTGATGGTGCAGAGCACACCTATTGCATGCGAGAAATGCTTGAAAAGGTTCCAGAAGGAGACTGGTTATGTGAAGAATGCAAATATGCTCAGGAGACTGAAAATCAAAAGCTGGGTAAAATTAATTCAACTGCACATATCTCTGGAAAAAGGCCTCTTGAAAGTGAAGAATTGGCTAAGGCAGCAAAAAAGCAAGCTCTTGAGTCAAACATTGGGTCACCAAAGGGTTCAAGCCCCAAGAGAGTATTTCCACTGTCACGAGAGTCTTCATTCAAGAACCTTGATAAGGGAAAGTTGAATTCTGGTTACCACAGCTCCATTTGTAATCACCCTCATGGCAGTGACAGAGAACTTGCTCGCTCTCTTTCAGCTGGTCCTCGAAGTCAAACAACAAAGAGTACATTGTTGAAGTCAAATTCATTCAATACGAATTCCAACCCAAGAGTCAAACTTGTTGATGAAGTCCCACAAAAGAAGAAAGGGGGCAGCGAACATGCTTCTAAGAATAGTGAGACACCAAGGCAAATGATTAGCAAATCTACATCATTCAAATCATCGAATTTGAGCCGTTCAAGTGCCACTGAATCAAAAGTTAAAATGCTTACTTCTAAGTCTAGATCCACACAGGACCTGAAAGGATCAAGACTAACAAAAGAATCTGACAGGAAATTTCTCTCTAGGGTTGATCAGCCTGTGGTTTGTTCAACCATTTCCAAACCTATAGGTGACCATAAGCTTTCCCCTCATGGTGAGACCAGTAAACCTTCTGCAGTTAACAATCGAGAGTGTAAGGGCAACCCAGATGTGAGATCAAATTCATTATCTAAGAATAATATAAACCGCAAGAGTTCGGCACCTTTATTTAGTGCAGAAAGAATAGCAACCAGTGGTGAAGAAACTCAATTGGATGGGCCGCCTCAATCAAGAGAATTTTCAAATCAAATTGATAATACCAAAGATAGTTCTAGTGATCATGTGAGCTCTGGTCTTACTAATGCTTCTGGAAGCTCAGTCTTTCACAAAAGTAAGGATTTTGGCCATGCAACAGAATGTCGCGGGGTTGCTAATAGAGAAGAATTCAGCCTCGAAGGATCAACCACTGCCCCAAACAGTTCAAAAGACAAAATACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTGCTTAGAAGGCCTGAAATATGCAAGAAGAAAGAAGTACCTGATCGAACTGATGAATTTTCTACATCAGGCACAGACTTGAATTCAGAAGTCAGTTCTCAGGATCAGGCGATTGTTATCAACACACCAAAGAATATTCTTTCTACTGAAGAAACAAAAGCGAGGCAGGAGATCCTTCACAACCCAACATTTGAAACTCCATCTTCCAATGGTTCGAAGCCAGTTAGCTTTGGTCCAATACAGCCAAGAAAGTTAGAATCTGTTGGTCCTGATCCTGGAAATCCTGTAGTGAGAGATTTCCAGAATCAAGCTTTGGCTGTCTCAAGTGTTCTTTCACAGATAGCAGCCTTTCCAGAACATCAATTCATCTGGCAAGGTGTCTTTCAAGTGCACAGATATGGAAAGCTACCTAACTTGTATACTGGAATTCAAGCACATTTATCCACATGTGCATCCCCCAAGGTTCTTGAGGTAGTGAACAAGTTTCTACCTGAAGTTTCCCTCGATGAAGTTTCTCGCTTGAGCACTTGGCCTTCACAATTTCATCAAGGCAGGGCTAGGGAAGATAATATCGCTCTTTACTTTTTTGCCAAAGACATTGAAAGTTATAAGAGACACTACAAGGGTCTACTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAAGTTTTGATGGTGTTGAACTTCTCATATTCCCATCTAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGCTGTTTTTCTTATGGGGTGTATTTAGAGGACATAGGATGAATAATTTTGACTCTGCAAGAAAGGTTTGTATTCCCAGTTTGAACGTGGTGCCAGTTGAGAAGGATTTTCCAACTTCTGTCATGAATTTGTCTGAAACCCACAGCTCACTGAAGCGGATGGATGAACAATCAATTGCTTGTGGTAGCACAGGCAGTGCAGTTCTCCCTTCCACTTCCATAGGTGAAGGCCCTAATGTTTTCCATGGGGATTTTGATATCAAAGAAACTAGTGACGAGGCATGTTTGGGTTCACAAGTAAACTTACATAGGCAAGATACTAGAATCAACACTGAATCTACATTGGAGATTCCTTCAAGCAGTGGTCAGTTGTGCCAAGAATTGCATTCCGCAGGTTCATCCCCGAAAGATGGACAGCAGAGAGTCCCCACACCTCCTGAAGCAATGAGAACACTTGTAAGTAGCAGGATTGTGGAAACAAATAGTGACTATGACATTTCAGTCAAGCAAGAGAACTCTCTGTCTTCAGGGATTCCTTCTGCCGAGAAACAAGAGACAGATGCTGCAAGCAATACCTCTAAAAGTCAAATTTCAGAGAGAATTAACCATGATGAAGATCAACATAGGCCTAAAAGGAAACTGATAGAAGAAGATCTCAATATTAGCATAGAGGCAACGCTTCAAGAAGGCCCATCTGTAACAATCATAAACTGTCAGCAAACCAATGATAAAAGAGTTCAGCATATAGATGTTTCAAATGCAGTTTTGAAGGCTTCCACAGATAGTTATCAGAAATTGCCTTGGGATAAGGTCAATGGAAAATTGGAAGATGGAGAAAGTTCCAGCAAGAAGCTCAAGTCAGGTTTAACTGATATTTATGGAAGTTGTAGTTCAGGAGGTAGGGAATCTTCCAATGGCAGTTTTATGGCCCGTGCAAACCATCCTGGTACCTTCTCTTCAGTTGAGGACCTTGGAACCATGGAAAGAACCTTCTTTCCCGTTGATTCGCATAAGAAAAATGACTCACAATTGATGCTCAACGGCATGCCACTGGAGGGGTCTTGTGAGTATGAGGGTCAATTTCAAGTTGGGATTCCAAATCTAGAGCTTGCTTTGGGGGGCAAAATAAAACCACAGCCACTGCCAGTTCCAGCGCCGCCCCATAAGGGTATGTTCCCTTTTCTCGTCGGAGCTGTAGACAAGAAAAATAACCAGAAAAAACCACCTGAAGTAGTTGGGGATGAGCAAGAGGGCGACAACAGTGTTGCTGCATCTCTTTCGCTGTCTCTATCATTCCCATCATCAAATAAGGAACCTGTCAAACCTGCTCCAAAAGCTGAACATTCGACTGATGGGCATCATGTGAATACTCCGTTTCTCCTTTTTGGGAGATACACAGACAAATAA 3981 0.42 MIQNADMKLESGTCNVCSAPCSSCIHLSRALTRPKAKEFSDENCHLGEANLFSTDEGDQSSRRSRTCERLNHASSETGNMLGVNSCHESMSENAESTRALSEKYRDAKFLEGLDDNASCISRTSDADLIPVINGNTAVLSTRVYPKSESDSDSDVGNVKDKNHKVPVRDGLHEKQGEQVKSPVKPEAHSEDESDDSDVEHDVKVCDICGDAGREELLAVCSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAQETENQKLGKINSTAHISGKRPLESEELAKAAKKQALESNIGSPKGSSPKRVFPLSRESSFKNLDKGKLNSGYHSSICNHPHGSDRELARSLSAGPRSQTTKSTLLKSNSFNTNSNPRVKLVDEVPQKKKGGSEHASKNSETPRQMISKSTSFKSSNLSRSSATESKVKMLTSKSRSTQDLKGSRLTKESDRKFLSRVDQPVVCSTISKPIGDHKLSPHGETSKPSAVNNRECKGNPDVRSNSLSKNNINRKSSAPLFSAERIATSGEETQLDGPPQSREFSNQIDNTKDSSSDHVSSGLTNASGSSVFHKSKDFGHATECRGVANREEFSLEGSTTAPNSSKDKIHKDNRLKAAIQAALLRRPEICKKKEVPDRTDEFSTSGTDLNSEVSSQDQAIVINTPKNILSTEETKARQEILHNPTFETPSSNGSKPVSFGPIQPRKLESVGPDPGNPVVRDFQNQALAVSSVLSQIAAFPEHQFIWQGVFQVHRYGKLPNLYTGIQAHLSTCASPKVLEVVNKFLPEVSLDEVSRLSTWPSQFHQGRAREDNIALYFFAKDIESYKRHYKGLLDHMIRNDLALKGSFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGHRMNNFDSARKVCIPSLNVVPVEKDFPTSVMNLSETHSSLKRMDEQSIACGSTGSAVLPSTSIGEGPNVFHGDFDIKETSDEACLGSQVNLHRQDTRINTESTLEIPSSSGQLCQELHSAGSSPKDGQQRVPTPPEAMRTLVSSRIVETNSDYDISVKQENSLSSGIPSAEKQETDAASNTSKSQISERINHDEDQHRPKRKLIEEDLNISIEATLQEGPSVTIINCQQTNDKRVQHIDVSNAVLKASTDSYQKLPWDKVNGKLEDGESSSKKLKSGLTDIYGSCSSGGRESSNGSFMARANHPGTFSSVEDLGTMERTFFPVDSHKKNDSQLMLNGMPLEGSCEYEGQFQVGIPNLELALGGKIKPQPLPVPAPPHKGMFPFLVGAVDKKNNQKKPPEVVGDEQEGDNSVAASLSLSLSFPSSNKEPVKPAPKAEHSTDGHHVNTPFLLFGRYTDK* 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1109 1326 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 266 IPR013083 -
Ahy13g1109 1326 PANTHER - 1078 1317 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 1262 1315 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 1029 1055 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 143 198 - -
Ahy13g1109 1326 PANTHER - 7 129 - -
Ahy13g1109 1326 PANTHER - 135 1076 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 375 390 - -
Ahy13g1109 1326 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 135 1076 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 1029 1069 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 625 644 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 434 449 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 475 508 - -
Ahy13g1109 1326 SUPERFAMILY FYVE/PHD zinc finger 190 257 IPR011011 -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 517 562 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 1278 1294 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 391 433 - -
Ahy13g1109 1326 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1078 1317 - -
Ahy13g1109 1326 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 129 - -
Ahy13g1109 1326 SMART PHD_3 204 251 IPR001965 -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 285 312 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 984 998 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 325 564 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 984 1003 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 147 191 - -
Ahy13g1109 1326 MobiDBLite consensus disorder prediction 346 373 - -
Ahy13g1109 1326 ProSiteProfiles Zinc finger PHD-type profile. 202 253 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1109 Ahy-Chr13 12515905 12524394 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1109 201 261 C2H2 Transcription Factor Family AT3G01460 32.787 5.82e-06 49.3