Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1108 ATGATCCAGAACGCTGATATGGAACTTGAATCAGGGACTTGTAATATTTGCTCAGCTCCTTGTTCATCTTGCATGCATCTTAATCGAGCTCTAACTGGAACAAAGGCTGAAGAATGCTCTGATGAAAATTGTCGATCAGGGGAACCCAGTCAGTTTTCTATGGATGTGAGTGATCTATCTTCTCATAGGAGTACAGCTTGTGAAAGATTGAAGCATGCTGTCAGTGAAACCAGTAACTTGCTTCGTGTTAATTCTGGTCATGAATCTCTGTCTGAAAATGCTAAAACCACACAAACTTTATCAGAGAAGTATCACGATGCCAAGTGTTTAGAAGGACCTGATGACAGCTCTTCGTGTATCAGTAGAAACAGTAATGCTAATTTAGTTAGTGATAGCCATCAAAGAGATGCAGACAAAACAAATATTTCATGTAGTTCATCCTCAGTTAGTCACTTAGGAGCAGAAGGATCTACAAGTGGGCCATCTGTTTATATATCAGGCTTGTGTGAGATACCCTCTTCTAAAGATGCAGATATGCCAGAGAATTCATCAGAATGCTGTGTTGGAAATGTTGAGTCATCGCCAACCAAGGAGATAATCACTGCTAATTTTTCAGGTGAAAAATTTCTTGCAAATAACAAAGGCCTTGTTAATGGCACTACTAGCAAGTTTTCGGCAAAAGTATATCCAAAGTCAGAAGCAGATAGTGACAATGGTGTTGGTGATGTGAAAGACGAAGATCGTAAAGTTCCAGCCCATGATGGACTGCACGAGAAGCAGGGGGAGCTTGTTAAATCACCCGTCAAGCCCGAAGCTCAATCTGGAGATGAGAGCGATGACTCAGATGTTGAGCATGTAAAGGTATGTGACATCTGTGGAGATGCTGGTCGCGAGGAGCTACTTGCAATATGTAGTAGATGCAGTGATGGTGCAGAGCACACCTATTGCATGCGAGAAATGCTCGAAAAGGTCCCAGAAGGTGACTGGTTATGTGAAGAATGCAAGTATGCTGAGGAGACTGAAAAACATCGGCTGGATGTTGAAGAGAAAAAGGTCCATAAAGTTTGTTCAACTGCGCAAATATCTGGTAAAAGGCCTTCTGAGGGTGAAGAATGGGCAAAGGCAGGGAAAAGGCAAGCTCTTGAATCAAGTAAAGGGTCACCAAAGGGGTCAAGCCCCAAGAAAATATTTCCACTGTCGCGAGAGTCTTCGTTCAAGAGCATTGATAAAGGAAAGTTGAACTCTGATCATCAGACCTCCATTTGTAACCACTCCAATGGCAATGACATAGAACTTGCTCGTTCTCTATCTGCTGGTCCTCGGAGTCAAACAGCTAAGAGTACATTGTTAAAGTCAAATTCATTCAACAACATCAATTCCAAGCCCAGAGTCAAACTTGTTGATGATGTCCCGCAAAAGAAGAAAGGGGCTGGTGAACATACCTCTAAGAATATTGAGATGCCAGGACGAATGATAAGCAAATCTAGTTCATTGAAATCCTCAAATTTGGGTCATTCATGTGCCACTGAATCAAAAGTCAAAATGGTTACTTCCAAACCTGGAACTACTGCGGATCAAAAAGGATCAAAACTAGCAAAAGAATCAGGTGCCTCTCATAGGAAATTTTTCTCTAGGGTTGATCGGCCTGTTGTTTGTTCAACCATGGCTAGTTCTGCTGTTCTGACATCTAAGAGTGATCAGAAGCTTACCCCTCGTAGCGAAACTGCTAAACCTTCAACAATTAACAACAATCACGAATTTAAGGTCAACCAAGATGGGAGATCAAATTCATTATTGAAGTCTAAGAATAATACAAGCCAGAGAACATCAACCAGTGGTGATGAAACTCAATTAGATGGGCTGCCTCAATCAAGAGAGATAACAAATCAGGTTGATAAAACCAAAGGTAGTTCTGGTGATTGTGTGAGGTCTGGTCTTACTAATGCTTCTGAAAGCCCATTCTGTCACAAATGTAAGGATTTAGGCCATGCTACAGAATGTTGCATGGTTGATAAACAGGAATTTGGCCTGGAAGGATCAGCCACTGTCCCAAACAGTTCAAAAGACAAAACACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTACTTAGAAGGCCCAAAATATGCAAGAGGAAAGAAGTGCCTGACCAAACTGAGAAGTTTCTTACATCAGCCATAGACATGAGGTCCGAAGTCACTTCTCAAGATAAGGCGTTTGTTATTGACACTCCAAAGAATATTGTTTCTACTGAAGAAACAAAAGTGAGGCAGGATATCCTTCAGAATCCTACATTTGAAACTTCGTCTTCCAATGATTCGAAGCAACATAGCTTTTGTCCAGCTGATTTTGGATCACAACCTAGAAAGTTAGAATCTGTTGGTCCTACTCCTGGAAATCCTGTAGTTAGAGACTTTTGCAATCAAGCTTTGGCTGTCTCAAGTGTTCTTCCAAAGACATCAGTCTTTCCAGAATATGAATACATTTGGCAAGGTGTCTTTCGAATGCATAGAAGTGGAAAGCCGCCTGACTTATGTACTGGTATTCAAGCGCATTTATCCACATGTGCTTCCCCTAAAGTTCTTGAGGTAGTGAACAAGATTCTTCCTGAGGTTTCCCTCAATGAAGTTTCTCGCTTGAGCACGTGGCCTACACAATTTCATCAAGGCGGGGCAAAGGAAGATAATATTGCACTTTACTTTTTTGCCAAAGACATTGAAAGTTACGAGAGACACTACAAGGGTCTACTGGATCACATGATTAGAAATGATTTAGCGCTTAAAGGAATTTTTGATGGTGTTGAACTTCTTATATTCCCCTCCAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGTTGTTTTACTTATGGGGTGTATTTAGAGGGCAGAGGAGGAATCATTCTGATTCTGCAAAAAAGATTTGTAGTCCCAGTTTGAATGCGTTGTCAGTTCAGAAGGGTTCTCTGACTGCTGTGATGACTGTGTCTGAAACCCACTGTTCACCAATGCGGATGGATGAACAACCAATTGCTTGTGGTAAAACCTGCAGTGAAGTTCTCTCATCCACTTCCATGGACCAAGGCGATACTGTTTTAAGTGGGGATTTTGATATTAAAGAAACTATTTTTGACCAGGCACGTTTGGGTCCACAAGTAAACTTACAGAGGCAAGATAGTAGAATCAACACGGAATCTGCATCAAAGAATCCGACAAGCAGTGAACAATTGTGCCAACAAATGCACTCTCCAGGTTCACCTCCGAAGCACAGAATCCCCACACCTCCTGAAGCAATGGGAACGCATGTAAGTAGCAGGATTTTGGAAACAAAAATTGATTGTGATATTTCAGTCAAGAAGGAGAACTCTCTGTCTTCTGGGATTCCTTCTGCTGGCAAACAAGAGATAGATGCTGCAAGCAATACCTCAAAGAATCAAATTTCAGAAAGAACTAACAATGATGAAGATCAGCGAAGGCCTAAAAGGAAACTGATAGAAGAGGATCTCAATGTTAACATGGAGGCAACCTTTCAAGATGATCCGACTATAAGAGGCACCAATTGTGAGCAAACCATTGATAAAAGAGTTGAGCATATAGATGTTTCAGATGCAGTTTTGAAGGCTTCCGCAGATAGTTATCAGAAATTGGAAGATGGAGAAACTTCCAGCAAGAAGCTCAAGTCAGGTTTCGGTGAAATTTATGCAAGTTGCAGTTCAGGTGGTAGGGAATCTTTCAATGGCAGTTTTACAGCCCTTGCAAACCATCCCGGTACCTTCTCTTCAGTTGAGGGTAGAGGATGCAACGAAGCTTGCTTAGATGAAGTCATTCATGAGGACCTTGGAACTATGGAAAGAACCTTCTTTCCTGTCGGTTTGCATCAGAAAAATGACTCTCGCTTGATGCTTAATGGCATGCCAGTGGAGGGGCCTTGTGATTACGAGGGTCACTTTCAAGTTGGGATTCCAAACCTAGAGCTTGCTTTGGGGGGCGAAACAAAACCACAACCACCGCCAGCACCGCCACTACCACCACGTAAGGGTATGTTCCCTTTTCTTGTCAGGGATGGAGACAAGAAAAATAACCAGGAAAAGCCACCTGAAGTAGTGGCGGATGAGAAAGAGGGTGATGACAGTGTTGCTGCATCTCTTTCCCTGTCTCTATCATTCCCATCTTCAAATAAGGAACCTGTCAAACCAACTCCAAAAGCTGAACATTCGCCTGATGGGCATCATGTGAATACTTCGTTTCTCCTTTTTGGGAGATACACAGACAAATAA 4284 0.4202 MIQNADMELESGTCNICSAPCSSCMHLNRALTGTKAEECSDENCRSGEPSQFSMDVSDLSSHRSTACERLKHAVSETSNLLRVNSGHESLSENAKTTQTLSEKYHDAKCLEGPDDSSSCISRNSNANLVSDSHQRDADKTNISCSSSSVSHLGAEGSTSGPSVYISGLCEIPSSKDADMPENSSECCVGNVESSPTKEIITANFSGEKFLANNKGLVNGTTSKFSAKVYPKSEADSDNGVGDVKDEDRKVPAHDGLHEKQGELVKSPVKPEAQSGDESDDSDVEHVKVCDICGDAGREELLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAEETEKHRLDVEEKKVHKVCSTAQISGKRPSEGEEWAKAGKRQALESSKGSPKGSSPKKIFPLSRESSFKSIDKGKLNSDHQTSICNHSNGNDIELARSLSAGPRSQTAKSTLLKSNSFNNINSKPRVKLVDDVPQKKKGAGEHTSKNIEMPGRMISKSSSLKSSNLGHSCATESKVKMVTSKPGTTADQKGSKLAKESGASHRKFFSRVDRPVVCSTMASSAVLTSKSDQKLTPRSETAKPSTINNNHEFKVNQDGRSNSLLKSKNNTSQRTSTSGDETQLDGLPQSREITNQVDKTKGSSGDCVRSGLTNASESPFCHKCKDLGHATECCMVDKQEFGLEGSATVPNSSKDKTHKDNRLKAAIQAALLRRPKICKRKEVPDQTEKFLTSAIDMRSEVTSQDKAFVIDTPKNIVSTEETKVRQDILQNPTFETSSSNDSKQHSFCPADFGSQPRKLESVGPTPGNPVVRDFCNQALAVSSVLPKTSVFPEYEYIWQGVFRMHRSGKPPDLCTGIQAHLSTCASPKVLEVVNKILPEVSLNEVSRLSTWPTQFHQGGAKEDNIALYFFAKDIESYERHYKGLLDHMIRNDLALKGIFDGVELLIFPSNQLPENSQRWNMLFYLWGVFRGQRRNHSDSAKKICSPSLNALSVQKGSLTAVMTVSETHCSPMRMDEQPIACGKTCSEVLSSTSMDQGDTVLSGDFDIKETIFDQARLGPQVNLQRQDSRINTESASKNPTSSEQLCQQMHSPGSPPKHRIPTPPEAMGTHVSSRILETKIDCDISVKKENSLSSGIPSAGKQEIDAASNTSKNQISERTNNDEDQRRPKRKLIEEDLNVNMEATFQDDPTIRGTNCEQTIDKRVEHIDVSDAVLKASADSYQKLEDGETSSKKLKSGFGEIYASCSSGGRESFNGSFTALANHPGTFSSVEGRGCNEACLDEVIHEDLGTMERTFFPVGLHQKNDSRLMLNGMPVEGPCDYEGHFQVGIPNLELALGGETKPQPPPAPPLPPRKGMFPFLVRDGDKKNNQEKPPEVVADEKEGDDSVAASLSLSLSFPSSNKEPVKPTPKAEHSPDGHHVNTSFLLFGRYTDK* 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 237 265 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 1353 1380 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 764 798 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 764 783 - -
Ahy13g1108 1427 ProSiteProfiles Zinc finger PHD-type profile. 286 337 IPR019787 -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 1060 1102 - -
Ahy13g1108 1427 PANTHER - 178 1170 - -
Ahy13g1108 1427 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1173 1418 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 514 529 - -
Ahy13g1108 1427 PANTHER - 1173 1418 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 514 539 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 1124 1163 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 1383 1397 - -
Ahy13g1108 1427 SUPERFAMILY FYVE/PHD zinc finger 276 340 IPR011011 -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 231 281 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 129 160 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 1335 1349 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 1060 1085 - -
Ahy13g1108 1427 PANTHER - 7 163 - -
Ahy13g1108 1427 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 178 1170 - -
Ahy13g1108 1427 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 163 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 1329 1427 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 139 160 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 1124 1150 - -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 559 623 - -
Ahy13g1108 1427 SMART PHD_3 288 335 IPR001965 -
Ahy13g1108 1427 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 359 IPR013083 -
Ahy13g1108 1427 MobiDBLite consensus disorder prediction 359 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1108 Ahy-Chr13 12480945 12488437 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1108 - - adu:107477384 2116.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1108 13 12480945 12488437 Ahy15g1207 15 19162226 19171069 ECH
Ahy13g1108 13 12480945 12488437 Ahy13g1108 13 12480945 12488437 ECH