Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1102 ATGTTTCAGAGATTACAGCTTCAAGTTTTAATTAAAATGGCTACCACTTCACAAGTTATTACCTGCAAAGGAGTAGTGTGCTGGGGAGGTGGAGAGGCTGTAAGATTAGAAGAGATTGAAGTTGATCCACCAAAATCAACTGAAATTCGAGTTAAGATGCTTTGTTCCAGCATCTGCCACACTGATATCAAAAGAATTAGAGGATCCCCAGTAGTGAAGTATCCTCTTGCTGTTGGACATGAAGGAGTCGGTGTTGTAGAGAGTGTTGGAGAGGAAGTGAAAAATCTAAAAGAAGGGGATATGGTGATTCCAACGTTCATAGGAGAGTGCAAACAATGTGAGATTTGCATTTCAGGAAAATCCAATTTGTGCATGACAAACCCTTTAATGCTGAATGGATTGATGAGAGACAACACTTCAAGGTTGTCCTGCAAAGGCAAAAGGCTTCACCATATTTTCAGTTGTGCCACTTGGTCAGAGTACATGGTTGTTGATGCCAACTATGCTTTTAAAGTTGATCCAAGCATTGACCTAGCACATGCCAGTTTCATCTCATGTGGCTTTTCAACTGGTTATGGTGCTGCTTGGAAGGAAGCTAAGGTTGAAAGTGGATCAAGTGTTGCTGTTTTTGGTCTTGGCGCTGTTGGATTGGGGGCCATCAGCGGAGCAAAAATGATGGGAGCAACTAAGATAATAGGGATTGACAAAAATGATATGAAAAGAGAAAAAGGAGAAATTTTTGGAATGACTCACTTTATAAATCCTAGTGATTCTGATATGCCTCCATCAGAATTGGTGAAAGAATTGAGTGATGGAAGAATGGGTGTGGATTATTCTTTTGAGTGCACTGGAATCAGCCATTTGATTATTGAGTCCCTACAAGCCACAAAAGTGGGAACAGGTAAAACAATTGTAATTGGTGCACCAACTGAACCAATTGAGCCATTTGGTTTTGCTTCAATCCTTAAAGGCAAGACTTTGAAAGGTTCTATCTTTGGAGGGTTAAAAGCAAATTCAGACCTTTCCATTATAGCTGACAAATGCCACAAAAGGGAATTTCCTCTTGAAGAATTATACACTCATGAGGTTCAATTGGCAGATATAAATCAAGCATTTGAGCTTTTGAAACAGCCCAATTGTGTGAAAGTTGTCATCAAGATATGA 1164 0.3969 MFQRLQLQVLIKMATTSQVITCKGVVCWGGGEAVRLEEIEVDPPKSTEIRVKMLCSSICHTDIKRIRGSPVVKYPLAVGHEGVGVVESVGEEVKNLKEGDMVIPTFIGECKQCEICISGKSNLCMTNPLMLNGLMRDNTSRLSCKGKRLHHIFSCATWSEYMVVDANYAFKVDPSIDLAHASFISCGFSTGYGAAWKEAKVESGSSVAVFGLGAVGLGAISGAKMMGATKIIGIDKNDMKREKGEIFGMTHFINPSDSDMPPSELVKELSDGRMGVDYSFECTGISHLIIESLQATKVGTGKTIVIGAPTEPIEPFGFASILKGKTLKGSIFGGLKANSDLSIIADKCHKREFPLEELYTHEVQLADINQAFELLKQPNCVKVVIKI* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1102 387 PANTHER ALCOHOL DEHYDROGENASE 17 386 - -
Ahy13g1102 387 Pfam Alcohol dehydrogenase GroES-like domain 47 172 IPR013154 -
Ahy13g1102 387 SUPERFAMILY GroES-like 15 202 IPR011032 -
Ahy13g1102 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 79 93 IPR002328 GO:0008270|GO:0016491
Ahy13g1102 387 SMART PKS_ER_names_mod 30 385 IPR020843 GO:0016491
Ahy13g1102 387 Gene3D - 26 382 - -
Ahy13g1102 387 PANTHER ALCOHOL DEHYDROGENASE-RELATED 17 386 - -
Ahy13g1102 387 Pfam Zinc-binding dehydrogenase 214 335 IPR013149 -
Ahy13g1102 387 Gene3D - 191 330 - -
Ahy13g1102 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 176 344 IPR036291 -
Ahy13g1102 387 CDD liver_alcohol_DH_like 20 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1102 Ahy-Chr13 12446213 12448744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1102 47 379 Monolignol Biosynthesis Gene Families AT2G21730 25.223 2.74e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1102 K00121 - gmx:100798341 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1102 13 12446213 12448744 Ahy13g1102 13 12446213 12448744 ECH